DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15471 and lysmd1

DIOPT Version :9

Sequence 1:NP_001138156.1 Gene:CG15471 / 31412 FlyBaseID:FBgn0029726 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001070218.1 Gene:lysmd1 / 791996 ZFINID:ZDB-GENE-060929-1094 Length:211 Species:Danio rerio


Alignment Length:66 Identity:20/66 - (30%)
Similarity:37/66 - (56%) Gaps:3/66 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HSITAEDTMTRLALKYDTSIGRICRANRMHSQDVLQARRHVWVPI--PNSQFQMGCQEKSESDES 88
            |.:...:|:..|:|||..|:.:|.||||:::.:.:..:..::||:  .:..|..|. |.:|...|
Zfish    42 HIVQPGETLQGLSLKYGVSMEQIKRANRLYTNESIFLKESLFVPVLTESVSFTNGV-ELTEEKTS 105

  Fly    89 P 89
            |
Zfish   106 P 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15471NP_001138156.1 LysM 26..69 CDD:279777 12/42 (29%)
lysmd1NP_001070218.1 LysM 40..84 CDD:212030 12/41 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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