DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15471 and lysmd2

DIOPT Version :9

Sequence 1:NP_001138156.1 Gene:CG15471 / 31412 FlyBaseID:FBgn0029726 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001037868.1 Gene:lysmd2 / 733450 XenbaseID:XB-GENE-940230 Length:207 Species:Xenopus tropicalis


Alignment Length:119 Identity:28/119 - (23%)
Similarity:50/119 - (42%) Gaps:25/119 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SECWTRHSITAEDTMTRLALKYDTSIGRICRANRMHSQDVLQARRHVWVPI-------------- 70
            ||.:..|.::..||:..:||||..::.:|.|||::.|.|.:..|:.:.:|:              
 Frog    57 SERYIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLNIPVISKKGSLFNGLGSL 121

  Fly    71 --PNSQFQMGCQEKSESDESPEISIRKVTPNLPSHFYRQSDPNPNPFACDDDPL 122
              |.::.|..|...::.....|..    |.::||     |.....|....|:.|
 Frog   122 DSPENETQDNCNSPTKEPALAEAH----TVSIPS-----SAKTNQPIVRSDEEL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15471NP_001138156.1 LysM 26..69 CDD:279777 14/42 (33%)
lysmd2NP_001037868.1 LysM 61..105 CDD:212030 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..207
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003034
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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