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Protein Alignment CG15471 and lmd-2
DIOPT Version :9
Sequence 1: | NP_001138156.1 |
Gene: | CG15471 / 31412 |
FlyBaseID: | FBgn0029726 |
Length: | 128 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_491415.2 |
Gene: | lmd-2 / 172073 |
WormBaseID: | WBGene00015008 |
Length: | 159 |
Species: | Caenorhabditis elegans |
Alignment Length: | 131 |
Identity: | 32/131 - (24%) |
Similarity: | 65/131 - (49%) |
Gaps: | 26/131 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 TEDRGPNICNCSRMRSECWTRHSITAEDTMTRLALKYDTSIGRICRANRMHSQDVLQARRHVWVP 69
|:.:...:..|| :|.:.:..:||:.|:|||::.|:..:.|||::.|...|..::.:.:|
Worm 36 TQSQSSPVTPCS------YTIYQVQTDDTLERIALKHNCSVSSLVRANKLWSPSALFMKQFIRIP 94
Fly 70 IPNSQ--------FQMGCQ---------EKSESDESPEISIRKVTPNLPSHFYRQSDPNPNPFAC 117
|.||| .:..|: :.|..::|.:..::::..|:.| :|:.| ||:..|.
Worm 95 IFNSQQPNLKPSLQETQCKIVPATTERVDSSREEKSMKDILQRIDRNIKS--FRKCD-NPSSSAY 156
Fly 118 D 118
|
Worm 157 D 157
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG15471 | NP_001138156.1 |
LysM |
26..69 |
CDD:279777 |
12/42 (29%) |
lmd-2 | NP_491415.2 |
LysM |
50..93 |
CDD:197609 |
12/42 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2850 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003034 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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