DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15471 and LYSMD4

DIOPT Version :10

Sequence 1:NP_572187.2 Gene:CG15471 / 31412 FlyBaseID:FBgn0029726 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_689662.2 Gene:LYSMD4 / 145748 HGNCID:26571 Length:297 Species:Homo sapiens


Alignment Length:111 Identity:27/111 - (24%)
Similarity:39/111 - (35%) Gaps:24/111 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CNCS-----RMRSECWTRHSITAE----------DTMTRLALKY-------DTSIGRICRANRMH 55
            |.||     |..|..| |.|:.|.          ||...|...:       :..:..|.:.|...
Human    43 CCCSGSWPRRTASTSW-RCSMAANTFYFRPNGAGDTRQNLIPDFYAFRVINNGKVADIKKVNNFI 106

  Fly    56 SQDVLQARRHVWVPIPNSQFQMGCQEKSESDESPEISIRKVTPNLP 101
            .:..|.|.:.|.:|:.|....|...::.:...||. |...||..||
Human   107 REQDLYALKSVKIPVRNHGILMETHKELKPLLSPS-SETTVTVELP 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15471NP_572187.2 LysM 26..69 CDD:396179 10/59 (17%)
LYSMD4NP_689662.2 None

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