DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klf15 and lmd

DIOPT Version :10

Sequence 1:NP_572185.1 Gene:Klf15 / 31410 FlyBaseID:FBgn0025679 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_732811.1 Gene:lmd / 42717 FlyBaseID:FBgn0039039 Length:866 Species:Drosophila melanogaster


Alignment Length:271 Identity:74/271 - (27%)
Similarity:106/271 - (39%) Gaps:63/271 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NYNQLEFEESDYYGIITLDSNNNTNTNGNIQVGLPHVEDPSLFIDFNDLTVCPPDLSDWEQRLLD 113
            ||...||.:::.:.  :|||:::.|.|        ..||     |.::....||..||.:     
  Fly   372 NYLSDEFIKAEEFR--SLDSDDDENYN--------EEED-----DLDNDVFAPPAESDPK----- 416

  Fly   114 NYVEIPDLVDFLPERTP-------LCTDNCADFLEESNSNLRLSGPPHSEIFVP-------DRSS 164
                 ||.....||..|       :|.....|  ||.         ||.:.||.       |...
  Fly   417 -----PDSTCCDPEAEPENEVIPLICRWTGCD--EEF---------PHQQAFVEHIEKCHVDVRK 465

  Fly   165 SSPGSSDSASPAEAVAPPSA-----LQMSENAAGERGYLCTFGNCEKIYAKPAHLKAHLRRHLGE 224
            ....|...........|.:|     :.|..: :||:...|.|..|.|.:::..:||.|.|.|.||
  Fly   466 GEDFSCFWLDCPRRYKPFNARYKLLIHMRVH-SGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGE 529

  Fly   225 KPYVCSWPDCVWRFSRSDELARHKRSHSGVKPYKCDY--CSKCFARSDHLTKHRKVHERR----- 282
            :||.|.:..|:..||.|.:.|:|:|:|...|||.|..  |:|.:.....|.||.|.|..|     
  Fly   530 RPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQ 594

  Fly   283 LLAASRAGRSL 293
            |...|..|.|:
  Fly   595 LRRKSAGGASV 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf15NP_572185.1 SFP1 <193..277 CDD:227516 33/85 (39%)
C2H2 Zn finger 203..221 CDD:275368 6/17 (35%)
C2H2 Zn finger 229..251 CDD:275368 8/21 (38%)
zf-H2C2_2 243..268 CDD:463886 10/26 (38%)
C2H2 Zn finger 259..279 CDD:275368 7/21 (33%)
lmdNP_732811.1 SFP1 <493..585 CDD:227516 34/92 (37%)
C2H2 Zn finger 504..526 CDD:275368 8/21 (38%)
C2H2 Zn finger 534..556 CDD:275368 8/21 (38%)
C2H2 Zn finger 564..586 CDD:275368 7/21 (33%)

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