DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klf15 and klf-3

DIOPT Version :10

Sequence 1:NP_572185.1 Gene:Klf15 / 31410 FlyBaseID:FBgn0025679 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:215 Identity:72/215 - (33%)
Similarity:103/215 - (47%) Gaps:34/215 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PHVEDPSLFIDFNDLTVCPP-DLSDWEQRLLDNYVEIP-----DLVDFLP-----ERTPLCTDNC 136
            ||:             :|.| |:.....|....|.|:.     .|....|     |..|...:|.
 Worm   114 PHI-------------ICNPYDVPTTSDRNPPYYTEVTTVSAVTLHSMTPPTHKIETPPSSPENS 165

  Fly   137 ADFLEESNSNLRLSGP----PHSEIFVPDRSSSSPGSSDSASPAEAVAPPSALQMSENAAGERGY 197
            ...|......:::..|    ||:......|||.|..:|...||.:.   .|.::.::....::.:
 Worm   166 FGPLASQLPAIKMEIPMHPLPHNGELDSTRSSPSSTTSSERSPLQR---KSRIESNKRNPTDKKF 227

  Fly   198 L---CTFGNCEKIYAKPAHLKAHLRRHLGEKPYVCSWPDCVWRFSRSDELARHKRSHSGVKPYKC 259
            :   ||:..|.|.|:|.:|||||.|.|.||||:||.|.:|.|:|:|||||.||.|.|:|.||::|
 Worm   228 VVHACTYPGCFKKYSKSSHLKAHERTHSGEKPFVCKWQNCSWKFARSDELTRHMRKHTGDKPFRC 292

  Fly   260 DYCSKCFARSDHLTKHRKVH 279
            ..|.:.|||||||:.|.|.|
 Worm   293 SLCDRNFARSDHLSLHMKRH 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf15NP_572185.1 SFP1 <193..277 CDD:227516 45/86 (52%)
C2H2 Zn finger 203..221 CDD:275368 10/17 (59%)
C2H2 Zn finger 229..251 CDD:275368 13/21 (62%)
zf-H2C2_2 243..268 CDD:463886 12/24 (50%)
C2H2 Zn finger 259..279 CDD:275368 11/19 (58%)
klf-3NP_001022205.1 SFP1 <215..314 CDD:227516 47/98 (48%)
C2H2 Zn finger 235..254 CDD:275368 10/18 (56%)
C2H2 Zn finger 262..284 CDD:275368 13/21 (62%)
zf-H2C2_2 276..301 CDD:463886 12/24 (50%)
C2H2 Zn finger 292..312 CDD:275368 11/19 (58%)

Return to query results.
Submit another query.