DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klf15 and sptf-2

DIOPT Version :10

Sequence 1:NP_572185.1 Gene:Klf15 / 31410 FlyBaseID:FBgn0025679 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_495833.1 Gene:sptf-2 / 188733 WormBaseID:WBGene00011926 Length:166 Species:Caenorhabditis elegans


Alignment Length:154 Identity:59/154 - (38%)
Similarity:83/154 - (53%) Gaps:22/154 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 ESNSNLRLSGPPHSEIFVPDRSSSSPGSSDSAS-----------PAEAVAPPSALQMSENAAGER 195
            ||:.:...|.|   .|..||..:|:..||.|:|           ..|....|:...:..   |:|
 Worm    13 ESHGSYHHSLP---SISPPDSPASTSASSSSSSIGANELTTKRRKCERCTCPNCKAIKH---GDR 71

  Fly   196 G----YLCTFGNCEKIYAKPAHLKAHLRRHLGEKPYVCSWPDCVWRFSRSDELARHKRSHSGVKP 256
            |    :||:...|.|.|.|.:||:||||:|.|::|:||.|.||..||.|||:|.||||:|:....
 Worm    72 GSQHTHLCSVPGCGKTYKKTSHLRAHLRKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYR 136

  Fly   257 YKCDYCSKCFARSDHLTKH-RKVH 279
            :.|.:|.:.|:|||||.:| ..||
 Worm   137 FACKFCIRQFSRSDHLQQHLTSVH 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf15NP_572185.1 SFP1 <193..277 CDD:227516 43/88 (49%)
C2H2 Zn finger 203..221 CDD:275368 10/17 (59%)
C2H2 Zn finger 229..251 CDD:275368 14/21 (67%)
zf-H2C2_2 243..268 CDD:463886 9/24 (38%)
C2H2 Zn finger 259..279 CDD:275368 9/20 (45%)
sptf-2NP_495833.1 zf-C2H2_8 79..156 CDD:464935 38/76 (50%)
C2H2 Zn finger 82..101 CDD:275368 10/18 (56%)
C2H2 Zn finger 109..131 CDD:275368 14/21 (67%)
C2H2 Zn finger 139..156 CDD:275368 8/16 (50%)

Return to query results.
Submit another query.