DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klf15 and klf15.2

DIOPT Version :9

Sequence 1:NP_572185.1 Gene:Klf15 / 31410 FlyBaseID:FBgn0025679 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_002933048.2 Gene:klf15.2 / 100494101 XenbaseID:XB-GENE-1018580 Length:378 Species:Xenopus tropicalis


Alignment Length:382 Identity:118/382 - (30%)
Similarity:167/382 - (43%) Gaps:121/382 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EPLAGGDALLNIVS-------VGEFDSTYV-------DTSFSGGNYNQL------EFEESDYY-- 61
            :||.|.|.:.|..|       :.:::.|.|       |.|.:.....||      :.:|.|.:  
 Frog     8 KPLPGADIISNAASPCDLTMAISQWEETPVPTIMKTNDCSSASSLDEQLNSTIAFKKDECDDFPQ 72

  Fly    62 ---------GII------TLDSNNNTNTNGNIQVGLPHVEDPSLFIDFNDLTVCPPDLSDWEQRL 111
                     |||      |:|....|..:.:::|.......|..|         .|.|.:.|:.|
 Frog    73 EGGLQEEVGGIIFSHLVRTVDDTKETTQSAHLKVPDFSAAFPQEF---------SPTLEEIEEFL 128

  Fly   112 LDNYVEIPDLV-DFLPERTPLCT---DNCADFLEESNSNLRLSGPPHSEIFVPDRSSSSPGSS-- 170
            .||.    ||: :.|.|...:.:   .:|....:.|.::..|||...|....|:.|::||.|:  
 Frog   129 KDNM----DLIREELGENQAIPSGWLQSCKTGDQTSPTSEILSGEKLSTPVTPEASTNSPSSTGT 189

  Fly   171 -----------DSASPAE--------------------AVAP------------------PSALQ 186
                       .::|||:                    |:||                  |.|::
 Frog   190 IPVILQIQPVPGTSSPAQSSSGTVRVAQLLISVQGQSLALAPMPGPASPGDQKYVRIAPLPVAVR 254

  Fly   187 --------MSEN--------AAGERGYLCTFGNCEKIYAKPAHLKAHLRRHLGEKPYVCSWPDCV 235
                    :||.        ||..|.:.|:...|.|:|.|.:|||||.|||.|||||||:||||.
 Frog   255 PLTLGGVFVSEGQQRTQKGAAAVIRVHKCSHPGCNKMYTKSSHLKAHFRRHTGEKPYVCTWPDCG 319

  Fly   236 WRFSRSDELARHKRSHSGVKPYKCDYCSKCFARSDHLTKHRKVHERRLLAASRAGRS 292
            |||||||||:||||||||||||:|..|.|.|||||||:||.|:|..:.:..:|..|:
 Frog   320 WRFSRSDELSRHKRSHSGVKPYQCVVCDKKFARSDHLSKHMKIHRGQRVGGTRIPRA 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf15NP_572185.1 zf-C2H2_8 199..278 CDD:292531 57/78 (73%)
C2H2 Zn finger 203..221 CDD:275368 10/17 (59%)
C2H2 Zn finger 229..251 CDD:275368 18/21 (86%)
zf-H2C2_2 243..268 CDD:290200 18/24 (75%)
C2H2 Zn finger 259..279 CDD:275368 13/19 (68%)
klf15.2XP_002933048.2 SFP1 <279..361 CDD:227516 58/81 (72%)
C2H2 Zn finger 283..305 CDD:275368 11/21 (52%)
C2H2 Zn finger 313..335 CDD:275368 18/21 (86%)
zf-H2C2_2 327..352 CDD:372612 18/24 (75%)
C2H2 Zn finger 343..363 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10740
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48965
Panther 1 1.100 - - LDO PTHR23235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 1 1.000 - - X4659
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

Return to query results.
Submit another query.