DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and gpr139

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001352082.1 Gene:gpr139 / 798482 ZFINID:ZDB-GENE-050823-2 Length:363 Species:Danio rerio


Alignment Length:473 Identity:93/473 - (19%)
Similarity:153/473 - (32%) Gaps:196/473 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IGLLGNSVSIYVLTR---KRMRCTTNIYLTALAITDIAYLTCQLILSLQHYDY----PKYHFKLY 110
            :||..|.:::.:|::   :|.:.:.| ||.|||:.||..|...:.:.....|:    |..|    
Zfish    38 LGLPANILTVIILSQLVLRRQKSSYN-YLLALAVADILVLLLIVFVDFLLEDFILGAPLPH---- 97

  Fly   111 WQLYGYFVWLCDSFGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVIAAVAIFCLLSTLS 175
             .|......|..|..:.||:|.|..||:|:||:.:||:..|....:..:|||.||...||:|:: 
Zfish    98 -SLNKAVQVLEFSSIHTSIWITVPLTIDRYIAVCHPLRYHTVSYPARTRKVILAVYAGCLISSV- 160

  Fly   176 TAFEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPATIWQSPDSAMESTT 240
                                                             |...|           
Zfish   161 -------------------------------------------------PYYWW----------- 165

  Fly   241 SGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVADAAQRSGVTESLL 305
                              ||       .|..     ||               .|...|      
Zfish   166 ------------------PE-------LWHG-----LP---------------GASPGG------ 179

  Fly   306 QLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYNHGLSELGYDELYSYLWNLFTLLVFVVFPLL 370
                |..||..|.:         |..:|..|                 ||           .|..
Zfish   180 ----RSSSAGQHVL---------VWVHCATV-----------------YL-----------LPCS 203

  Fly   371 LLATFNSILILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSVSQENRVTITLIAVVLMFIVCQ 435
            :..:.|:|::      :.||            .|:|...|:|  ....:.|..|:|:..:|.|..
Zfish   204 VFFSLNAIIV------RKLR------------CRRSCFRLRG--YSTGKTTAILLAITSVFAVLW 248

  Fly   436 LPWAIYLIVNQY-----MEIQIGTQVVAGNVCNLLASLHAASNFFLYCVLSDKYRKTVRELITG- 494
            .|..:.::.:.|     |........:..:|.|:||.|:...||||||.:|.::|:....::.. 
Zfish   249 APRTLMILYHLYTVQPAMPGPARLLHLVTDVANMLALLNTGVNFFLYCFISKRFRRMAGTVLKAF 313

  Fly   495 YRYRRR----HARNNTSL 508
            :|.|::    :|.:|.|:
Zfish   314 FRCRKQPPPFYASHNFSI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 40/136 (29%)
gpr139NP_001352082.1 7tmA_GPR139 28..306 CDD:320585 88/446 (20%)
TM helix 1 28..53 CDD:320585 4/14 (29%)
TM helix 2 61..86 CDD:320585 9/25 (36%)
TM helix 3 100..130 CDD:320585 11/29 (38%)
TM helix 4 142..162 CDD:320585 8/69 (12%)
TM helix 5 186..211 CDD:320585 8/61 (13%)
TM helix 6 228..260 CDD:320585 6/31 (19%)
TM helix 7 274..299 CDD:320585 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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