DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and Gpr142

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_038943713.1 Gene:Gpr142 / 501735 RGDID:1559926 Length:348 Species:Rattus norvegicus


Alignment Length:102 Identity:31/102 - (30%)
Similarity:58/102 - (56%) Gaps:5/102 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 LTNASSIRRTKRKSNSGLKGSVSQENRVTITLIAVVLMFIVCQLPWAIYLIVNQYM-EIQIGTQV 456
            :||::.|.|.:::...||:..:|:.   |..|:.|..:|.:...|....::.:.|: .:....:|
  Rat   221 VTNSAIILRLRKRGQRGLQPWMSKS---TAILLGVTSLFALLWAPRISVMLYHLYVAPVHRDWRV 282

  Fly   457 -VAGNVCNLLASLHAASNFFLYCVLSDKYRKTVRELI 492
             :|.::.|:||.|:.|.||.|||.:|..:|.|||::|
  Rat   283 HLALDIANMLAMLNTAVNFGLYCFISKTFRATVRQVI 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433
Gpr142XP_038943713.1 7tm_GPCRs 47..315 CDD:421689 27/96 (28%)
TM helix 1 48..74 CDD:410628
TM helix 2 82..107 CDD:410628
TM helix 3 121..151 CDD:410628
TM helix 4 163..183 CDD:410628
TM helix 5 200..225 CDD:410628 2/3 (67%)
TM helix 6 240..272 CDD:410628 6/34 (18%)
TM helix 7 283..308 CDD:410628 11/24 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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