DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Proc-R and MsR2

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster


Alignment Length:542 Identity:128/542 - (23%)
Similarity:215/542 - (39%) Gaps:151/542 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LVPCVFVIGLLGNSVSIYVLTRKRMRCTTNIYLTALAITDIA-------YLTCQLILS--LQHYD 101
            |:.|  ::|.:.|:::|.||||:.||..||..||.||:.|:|       |.....|||  |...:
  Fly    31 LIVC--ILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPREE 93

  Fly   102 YPKYHFKLYWQLYGYFVWLCDSFGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVIAAVA 166
            ...|.:..:.:.:..|..:..:   |||::.|...:.|:||:.||.:.:.:|........||...
  Fly    94 QLSYSWACFIKFHSVFPQVLHT---ISIWLTVTLAVWRYIAVSYPQRNRIWCGMRTTLITIATAY 155

  Fly   167 IFCLLST-----LSTA---FEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLP 223
            :.|:|..     |.||   |..|:....:.|  |..|.:|.:.:.:......:.|...      .
  Fly   156 VVCVLVVSPWLYLVTAIAKFLETLDANGKTI--ASVPLSQYILDYNRQDEVTMQVMSS------T 212

  Fly   224 TPATIWQSP-DSAMESTTSGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQ 287
            ||...|..| |||..:..|..|...|             ||          ..||.|        
  Fly   213 TPDVSWAIPSDSANGTAVSLLSLTTV-------------IP----------LTTLST-------- 246

  Fly   288 DQKVADAAQRSGVTESLLQLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYN--HGLSELGYDE 350
                       |||.| ..|..|                        |||.|.  |....|...:
  Fly   247 -----------GVTTS-SSLGER------------------------NVTVYKLYHSALALRDRQ 275

  Fly   351 LYSYLWNLFTLLVFVV--FPLLLLAT--FNSIL-------ILLVHRSKNLRGDLTNASSIRRTKR 404
            ..:..:.::::|:.::  |.|.:|:.  ..::|       ||..|.:.::: .:.|...:..|:.
  Fly   276 FRNATFLIYSVLIKLIPCFALTILSVRLIGALLEAKRRRKILACHAANDMQ-PIVNGKVVIPTQP 339

  Fly   405 KSNSGLKGSVSQENRVTITLIAVVLMFIVCQLPWAIYLIVNQ----------YMEIQIGTQVVAG 459
            ||...|: ...|.:|.|..|:||:|:|:|.:.|..|..::|.          |:::        .
  Fly   340 KSCKLLE-KEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLLGDAFFLQCYLKL--------S 395

  Fly   460 NVCNLLASLHAASNFFLYCVLSDKYRKTVRELITGYRYRRRHARNNTSLYVPHTTTTLTQINGDH 524
            ::.::||.::::.||.|||.:|.::|.|...|     :|.|.    ...::|     |:|.:|:.
  Fly   396 DLMDILALINSSINFILYCSMSRQFRSTFALL-----FRPRW----LDKWLP-----LSQHDGEG 446

  Fly   525 Y--GS----NYGGAGSRRNRNT 540
            .  ||    .|||.|.:|..:|
  Fly   447 RVGGSGGLGGYGGYGRQRLLHT 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 43/147 (29%)
MsR2NP_001261323.1 7tm_4 28..429 CDD:304433 114/492 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467298
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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