DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Proc-R and SPR

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster


Alignment Length:552 Identity:98/552 - (17%)
Similarity:189/552 - (34%) Gaps:224/552 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VPCVFVIGLLGNSVSIYVLTRKRMRCTTNIYLTALAITDIAYLTCQLILSLQHYDYP-KYHFK-- 108
            :|.:.:|.::.||:.:.||::|.|...||..|..:||.|:  ||.........|.|. ..|:|  
  Fly    96 MPFLLIITIISNSLIVLVLSKKSMATPTNFVLMGMAICDM--LTVIFPAPGLWYMYTFGNHYKPL 158

  Fly   109 ------LYWQLYGYFV-WLCDSFGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVIAAVA 166
                  |.:.::...: .:|.:   ||:::.:...::|:|.:.:....:|:||....::..|.:|
  Fly   159 HPVSMCLAYSIFNEIMPAMCHT---ISVWLTLALAVQRYIYVCHAPMARTWCTMPRVRRCTAYIA 220

  Fly   167 IFCLLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPATIWQS 231
            :...|..|...|:.|           |.|.                                   
  Fly   221 LLAFLHQLPRFFDRT-----------YMPL----------------------------------- 239

  Fly   232 PDSAMESTTSGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVADAAQ 296
                           :::|     :|.|..:    .|.::|                        
  Fly   240 ---------------VIEW-----NGSPTEV----CHLETS------------------------ 256

  Fly   297 RSGVTESLLQLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYNHGLSELGYDELYSYLWNLFTL 361
                      :|                    |.:|             :|.| ||...:.||.:
  Fly   257 ----------MW--------------------VHDY-------------IGVD-LYYTSYYLFRV 277

  Fly   362 LVFVVFPLLLLATFNSILILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSVSQENRVTITLIA 426
            |...:.|.::|.|.|.:|...:.:::..|..|     .|..::|....|:    :.|..|:.||.
  Fly   278 LFVHLLPCIILVTLNILLFAAMRQAQERRKLL-----FRENRKKECKKLR----ETNCTTLMLIV 333

  Fly   427 VVLMFIVCQLPWAIYL-------IVNQYMEIQIGTQVVAGNVCNLLASLHAA----SNFFLYCVL 480
            ||.:|::.::|.|:..       ::.::::..:      .|:|.:|.:....    .||.:||.:
  Fly   334 VVSVFLLAEIPIAVVTAMHIVSSLIIEFLDYGL------ANICIMLTNFFLVFSYPINFGIYCGM 392

  Fly   481 SDKYRKTVRELITGYRYRRR-------------------------------------HARNNTSL 508
            |.::|:|.:|:..|....::                                     |.|::||.
  Fly   393 SRQFRETFKEIFLGRLMAKKDSSTKYSIVNGARTCTNTNETVLXXLVMLVPRRGSSDHRRSSTST 457

  Fly   509 YVPHTTTTLTQINGDHYGSN-YGGAGSRRNRN 539
                ||||.|:..|   ||. .||..|.::::
  Fly   458 ----TTTTTTKTIG---GSMIIGGEASAQHQH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 34/140 (24%)
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 80/461 (17%)
TM helix 1 92..116 CDD:410630 6/19 (32%)
TM helix 2 124..146 CDD:410630 7/23 (30%)
TM helix 3 169..191 CDD:410630 3/24 (13%)
TM helix 4 214..230 CDD:410630 4/15 (27%)
TM helix 5 270..293 CDD:410630 6/22 (27%)
TM helix 6 328..353 CDD:410630 8/24 (33%)
TM helix 7 368..393 CDD:410630 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467296
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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