DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Proc-R and GPR18

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001091670.1 Gene:GPR18 / 2841 HGNCID:4472 Length:331 Species:Homo sapiens


Alignment Length:496 Identity:87/496 - (17%)
Similarity:161/496 - (32%) Gaps:210/496 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ILVPCVFVIGLLGNSVSIYVL--TRKRMRCTTNIYLTALAITDIAYLTCQLILSLQHYDYPKYHF 107
            :...|:|:|||..|..:::|.  |.|: |.|..||:..:|:.|:.::   :.|..:.:    |:.
Human    27 VFYSCIFIIGLFVNITALWVFSCTTKK-RTTVTIYMMNVALVDLIFI---MTLPFRMF----YYA 83

  Fly   108 KLYWQLYGYFVWLCDSFG-------YISIYIAVCFTIERFIAI---RYPLKRQTFCTESLAKKVI 162
            |..|....||   |...|       .|::::....:.:|::||   :|..:.:..|     |.|:
Human    84 KDEWPFGEYF---CQILGALTVFYPSIALWLLAFISADRYMAIVQPKYAKELKNTC-----KAVL 140

  Fly   163 AAVAIFCLLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPAT 227
            |.|.::  :.||:|                                          |.||   ..
Human   141 ACVGVW--IMTLTT------------------------------------------TTPL---LL 158

  Fly   228 IWQSPDSAMESTTSGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVA 292
            :::.||.                     |..|..                               
Human   159 LYKDPDK---------------------DSTPAT------------------------------- 171

  Fly   293 DAAQRSGVTESLLQLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYNHGLSELGYDELYSYLWN 357
                                                    |..:       |::.|.:..:.| |
Human   172 ----------------------------------------CLKI-------SDIIYLKAVNVL-N 188

  Fly   358 LFTLLVFVVFPLLLLATFNSILILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSVSQEN-RVT 421
            |..|..|.:.||.::.   ...::::|..  |.|         ||     |.||..|.::: |:.
Human   189 LTRLTFFFLIPLFIMI---GCYLVIIHNL--LHG---------RT-----SKLKPKVKEKSIRII 234

  Fly   422 ITLIAVVLMFIVCQLPWAIYLIVNQYMEIQIGTQVVA----GNVCNLLASLHAASNFFLYCVLSD 482
            |||:..||   ||.:|:.|.     :..:.:||...:    |.....|.:|....:..||.::|.
Human   235 ITLLVQVL---VCFMPFHIC-----FAFLMLGTGENSYNPWGAFTTFLMNLSTCLDVILYYIVSK 291

  Fly   483 KYRKTVRELITGYRYRRRHARNNTSLYVPHTTTTLTQINGD 523
            :::..|..::....|.|...|.:   :...:..:|:.||.:
Human   292 QFQARVISVMLYRNYLRSMRRKS---FRSGSLRSLSNINSE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 34/142 (24%)
GPR18NP_001091670.1 7tmA_NAGly_R_GPR18 23..297 CDD:320294 80/459 (17%)
TM helix 1 23..50 CDD:320294 7/22 (32%)
TM helix 2 57..82 CDD:320294 5/31 (16%)
TM helix 3 94..124 CDD:320294 5/29 (17%)
TM helix 4 136..158 CDD:320294 11/73 (15%)
TM helix 5 184..213 CDD:320294 7/32 (22%)
TM helix 6 225..255 CDD:320294 11/37 (30%)
TM helix 7 265..290 CDD:320294 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.