DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and sprr-3

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_500218.2 Gene:sprr-3 / 190541 WormBaseID:WBGene00022086 Length:465 Species:Caenorhabditis elegans


Alignment Length:545 Identity:94/545 - (17%)
Similarity:180/545 - (33%) Gaps:216/545 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FSDADMAEVRHVVQRILVPCVFVIGLLGNSVSIYVLTRKRMRCTTNIYLTALAITDIAYLTCQLI 94
            |.|.:......::..|::|.:.|:.::.|||.|.||::::.:..:...|..:||       |.|:
 Worm    41 FEDVENDVKLQIIYGIILPVLAVLVVVSNSVVILVLSQQKSKRASVEPLLWMAI-------CSLL 98

  Fly    95 LSLQHYDYPKYHFKLYWQL-YGYFVWLC-----------DSFGYISIYIAVCFTIERFIAIRYPL 147
            :::....:..|::.|...| :...::||           ..|..:.:...:...::|||.::|||
 Worm    99 MAISPLPFTIYYYNLSHHLDFNQTLFLCYLQKVCMEIMPFFFNNLVLLFTILLGVQRFIVVQYPL 163

  Fly   148 KRQTFCTESLAKKVIAAVAIFCLLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVA 212
            :...:||..:.::....:.|   |:|..|.| |::    ..|...|..|.:.             
 Worm   164 QSIRWCTPKMVRRYSKLILI---LATFLTGF-HSL----YDIRLLYHFCIKY------------- 207

  Fly   213 VTPPLATPPLPTPATIWQSPDSAMESTTSGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTL 277
                                                               |....|.:..|:..
 Worm   208 ---------------------------------------------------RDESFWVARCFIGY 221

  Fly   278 PTLRKTLEEQDQKVADAAQRSGVTESLLQLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYNHG 342
            .:|                                         |.||                 
 Worm   222 SSL-----------------------------------------TSAF----------------- 228

  Fly   343 LSELGYDELYSYLWNLFTLLVFVVFPLLLLATFNSILILL-------------VHRSKNLRGDLT 394
                |.| .:|.|::.|.:.:.::...||..    :.|||             |||.||      
 Worm   229 ----GAD-AFSALFDYFRITINLLASGLLFV----VTILLIQTIRTHDHPKQGVHRHKN------ 278

  Fly   395 NASSIRRTKRKSNSGLKGSVSQENRVTITLIAVVLMFIVCQLPWAIYLIVNQYMEIQIGTQVVAG 459
                     ||:::          ..||.|..:::::::.::|..:..::.:.|: .|....:|.
 Worm   279 ---------RKTSA----------NTTIMLTVIIIIYMLARVPTTLLFLLVKLMD-YISVPTIAF 323

  Fly   460 NVCNLL----------ASLHAASNFFLYCVLSDKYRKTVRELITGYRYRRRHARNN-----TSLY 509
            .|.|.:          .|||..| |.:|..:|.|:|.::|.|: |:|:.......|     |.::
 Worm   324 EVMNNIYLRVFANITTISLHPIS-FAIYMFMSRKFRVSMRRLL-GWRFLASDEEFNAFTSSTRIH 386

  Fly   510 VPHTTTTLTQINGDHYGSNYGGAGS 534
            ..|...||  :..:..||:..|..|
 Worm   387 TAHPKMTL--MEKESIGSSGKGTPS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 32/142 (23%)
sprr-3NP_500218.2 7tm_GPCRs 89..358 CDD:391938 69/441 (16%)
TM helix 2 89..110 CDD:341315 5/27 (19%)
TM helix 3 128..160 CDD:341315 4/31 (13%)
TM helix 4 172..201 CDD:341315 7/36 (19%)
TM helix 5 234..258 CDD:341315 5/27 (19%)
TM helix 6 279..316 CDD:341315 7/47 (15%)
TM helix 7 329..354 CDD:341315 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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