DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and dmsr-5

DIOPT Version :10

Sequence 1:NP_572183.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_499413.1 Gene:dmsr-5 / 190009 WormBaseID:WBGene00012962 Length:401 Species:Caenorhabditis elegans


Alignment Length:524 Identity:113/524 - (21%)
Similarity:188/524 - (35%) Gaps:187/524 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EANATVGEMFSDADMA--EVRHVVQRILVPCVFV--IGLLGNSVSIYVLTRKRMRC-TTNIYLTA 80
            |.|:|:  .|.|..:|  :|..|:.|.|  |:||  .|:|.||:..||||||.||. ..|..|.|
 Worm    12 ENNSTI--YFFDQLIAFNQVYTVLHRYL--CLFVCFFGVLLNSLHFYVLTRKAMRVYIINALLCA 72

  Fly    81 LAITDIAYLTCQL--ILSLQHYDYPKYHFKLYWQLYGY-FVWLCDSFGYI---------SIYIAV 133
            ::|.||..:|...  ||..:.:|.|.       .:.|| :.||.....::         |:|::|
 Worm    73 MSICDIITMTSYFIYILRFRIFDTPS-------TIIGYSYPWLIFLITHVTSSIALHTTSLYLSV 130

  Fly   134 CFTIERFIAI-RYPLKRQTFCTESLAKKVIAAVAIFCLLSTLSTAFEHTITIGTRQIDDAYQPCN 197
            .....|:.|: |...|   :......|:::...|:...:.::.|...|.|               
 Worm   131 IMAYIRWTALDRLDAK---WINHGALKQILIFTALIVSVISIPTVMVHKI--------------- 177

  Fly   198 QTVANISPMPPPPVAVTPPLATPPLPTPATIWQSPDSAMESTTSGSSNQLVDWGSGSGDGEPENI 262
                         |.||..|.                                            
 Worm   178 -------------VPVTEVLG-------------------------------------------- 185

  Fly   263 PRHRRHWQSSGFVTLPTLRKTLEEQDQKVADAAQRSGVTESLLQLWRRKRSAENHNINNTDAFAF 327
                                 :.|.|  :.:.|:..|:  ..:||       :...||....|..
 Worm   186 ---------------------MNETD--LLEGAKFDGL--YTVQL-------DETKINGCALFRV 218

  Fly   328 NVTEYCQNVTYYNHGLSELGYDELYSYLWNLFTLLVFVVFPLLLLATFNSILIL-LVHRS---KN 388
            |                          ||  .|.::|...|.||:..|...||. ||..|   |.
 Worm   219 N--------------------------LW--ITGIMFKALPCLLILWFTIALIYKLVQMSEKRKI 255

  Fly   389 LRGD----------LTNASSIRRTKRKSNSGLKGSVSQ------ENRVTITLIAVVLMFIVCQLP 437
            |||:          .|:|:....|:.:::..|: .|||      .:|.|:.||.::::|:..::|
 Worm   256 LRGEKRENVEFQLLATSATPTTTTRNEASPRLR-KVSQCSRNVSIDRTTLMLIIMLVVFLCTEMP 319

  Fly   438 WAIYLIVNQYMEIQIGTQVV--AGNVCNLLASLHAASNFFLYCVLSDKYRKTVRELITGYRYRRR 500
            ..:..|::......:.|.:.  .|.|.:|::.::..::|.:|||:|..||.||:.::.....||.
 Worm   320 QGLLSILSAIYPTHVHTMIYVNVGEVLDLMSLINCLTSFIVYCVMSTTYRATVKSVLCRSTSRRT 384

  Fly   501 HARN 504
            ..:|
 Worm   385 VFKN 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_572183.1 7tmA_FMRFamide_R-like 41..488 CDD:410630 101/484 (21%)
TM helix 1 42..68 CDD:410630 13/27 (48%)
TM helix 2 74..99 CDD:410630 9/26 (35%)
TM helix 3 114..144 CDD:410630 9/40 (23%)
TM helix 4 156..176 CDD:410630 2/19 (11%)
TM helix 5 351..378 CDD:410630 8/26 (31%)
TM helix 6 415..445 CDD:410630 9/35 (26%)
TM helix 7 456..481 CDD:410630 7/26 (27%)
dmsr-5NP_499413.1 7tmA_FMRFamide_R-like 32..372 CDD:410630 101/484 (21%)
TM helix 1 33..59 CDD:410630 13/27 (48%)
TM helix 2 66..91 CDD:410630 9/24 (38%)
TM helix 3 111..141 CDD:410630 5/29 (17%)
TM helix 4 151..171 CDD:410630 2/19 (11%)
TM helix 5 216..241 CDD:410630 10/52 (19%)
TM helix 6 297..327 CDD:410630 7/29 (24%)
TM helix 7 340..365 CDD:410630 7/24 (29%)

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