DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and frpr-8

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_509470.3 Gene:frpr-8 / 186144 WormBaseID:WBGene00018728 Length:434 Species:Caenorhabditis elegans


Alignment Length:510 Identity:94/510 - (18%)
Similarity:171/510 - (33%) Gaps:184/510 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MSSTSTATATSTATATLDE---ANATVGEMFSDADMAEVRHV---VQRILVPCVFVIGLLGNSVS 61
            |:||..:...::...|.|:   :.:|.|......:.|||.::   :..:.:|.:.|:|.....:.
 Worm     1 MNSTVISLLNNSTLVTTDQPGFSGSTKGTCSYPTNFAEVDYISTYIYLLAIPTICVLGAGAAVMC 65

  Fly    62 IYVLTRKRMRCTTNIYLTALAITDIAYLT-CQLILS------LQ-HYDYPKYHFKLYWQLYGYFV 118
            |.|.|||:||.:.|:||..|::.|:..|: ..||.|      || |.|....||  :|:...:.:
 Worm    66 IVVFTRKQMRSSLNVYLAGLSVFDLILLSFSALIFSPLQGCVLQGHGDTAVCHF--FWRSTPWTL 128

  Fly   119 WLCDSFGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVIAAVAIFCLLSTLSTAFEHTIT 183
            .:.:.....|::..|..|::||:|:.|||..:.:||...|..::.|:.:|.:|......||.|  
 Worm   129 PISNIAQCGSVWTCVAVTVDRFLAVNYPLHSKIWCTPRRATTILIAITVFSILFKAPMFFELT-- 191

  Fly   184 IGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPATIWQSPDSAMESTTSGSSNQLV 248
                 .||    |.:                                                  
 Worm   192 -----NDD----CGR-------------------------------------------------- 197

  Fly   249 DWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVADAAQRSGVTESLLQLWRRKRS 313
                                           ||                                
 Worm   198 -------------------------------LR-------------------------------- 199

  Fly   314 AENHNINNTDAFAFNVTEYCQNVTYYNHGLSELGYDELYSYLWNLFTLLVFVVFPLLLLATFNSI 378
                            |.:.::..||.......||            |:..::.|..::...|..
 Worm   200 ----------------TSFLRDNKYYKEYYVTFGY------------LIALLLIPWTVMIILNVF 236

  Fly   379 LILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSVSQENRVTITLIAVVLMFIVCQLPWAIYLI 443
            ::..||::..:|             |....|......::.|.|:..||:||.|::..:..|:..:
 Worm   237 VVKAVHKAYKIR-------------RSMQGGKNNQEEKDRRCTLMAIAMVLTFLIFNVVAAVNNL 288

  Fly   444 VNQYMEIQIGTQVVAGNVCNLLASLHAASNFFLYCVLSDKYRKTVRELITGYRYR 498
            .....|:.:|.....|   |||..|::|||..:|.:...::|:....::.|.:.|
 Worm   289 AETVFEVSLGFWSPIG---NLLICLNSASNIVIYSLFGARFRQMCVLMLCGRQSR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 43/138 (31%)
frpr-8NP_509470.3 7tmA_FMRFamide_R-like 45..330 CDD:320109 82/454 (18%)
TM helix 1 47..71 CDD:320109 5/23 (22%)
TM helix 2 79..101 CDD:320109 8/21 (38%)
TM helix 3 125..147 CDD:320109 2/21 (10%)
TM helix 4 170..186 CDD:320109 3/15 (20%)
TM helix 5 212..235 CDD:320109 4/34 (12%)
TM helix 6 263..288 CDD:320109 8/24 (33%)
TM helix 7 301..323 CDD:320109 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_119272
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17098
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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