DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and frpr-18

DIOPT Version :9

Sequence 1:NP_001014723.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_504746.1 Gene:frpr-18 / 179076 WormBaseID:WBGene00020586 Length:432 Species:Caenorhabditis elegans


Alignment Length:462 Identity:84/462 - (18%)
Similarity:150/462 - (32%) Gaps:191/462 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ILVPCVFVIGLLGNSVSIYVLTRKRMRCTT-NIYLTALAITDIAYLTCQL-ILSLQHYD------ 101
            |||  :.::|:.|||:|..:.:|..||.:: |:.|.||:..|.:.||..: |..:.:.|      
 Worm    11 ILV--IVLVGIFGNSLSFILFSRPHMRSSSVNVLLCALSFFDFSLLTLSIPIFVIPNLDLWANDL 73

  Fly   102 ----YPKYHFKLYWQLYGYFVWLCDSFGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVI 162
                |..|..||.:.: ...:..|      |:||.|..|:||::|:..||:.:.:||...::..|
 Worm    74 SLSTYMAYILKLIYPI-NLMMQTC------SVYIMVMITLERWVAVCRPLQVRVWCTPRKSRNAI 131

  Fly   163 AAVAIFCLLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPAT 227
            ..:.:...|......||:...:                                           
 Worm   132 LVIIVSAFLYNFVRFFEYRFVV------------------------------------------- 153

  Fly   228 IWQSPDSAMESTTSGSSNQLVDWGSGSGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVA 292
                       |.||:..:  .|....|        :||  |...|:.|:               
 Worm   154 -----------TESGALYE--KWLRDPG--------KHR--WYYVGYYTI--------------- 180

  Fly   293 DAAQRSGVTESLLQLWRRKRSAENHNINNTDAFAFNVTEYCQNVTYYNHGLSELGYDELYSYLWN 357
                                                                             
 Worm   181 ----------------------------------------------------------------- 180

  Fly   358 LFTLLVFVVFPLLLLATFNSILILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSVSQENRVTI 422
            |:.:..|:| |..::|..|..:|:.:.:....|..||     |:.:|            |...|:
 Worm   181 LYIVTHFLV-PFSVMAFANGHVIVAMCKLSKTRQMLT-----RQQQR------------EQSTTV 227

  Fly   423 TLIAVVLMFIVCQ-LPWAIYLIVNQYM-----EIQIGTQVVAGNVCNLLASLHAASNFFLYCVLS 481
            .|:.|..:|.:|. ||:.:.:..:.:.     |...|......::.|||..|::.:.|.:|...|
 Worm   228 MLLIVTFVFAICNTLPFLLNVSESIFPTLFQDESTRGLAYWLNDLSNLLVVLNSGTTFIIYFTFS 292

  Fly   482 DKYRKTV 488
            :|||:|:
 Worm   293 EKYRQTL 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_001014723.1 7tm_4 52..>183 CDD:304433 38/142 (27%)
frpr-18NP_504746.1 7tmA_FMRFamide_R-like 6..299 CDD:320109 83/460 (18%)
TM helix 1 6..32 CDD:320109 8/22 (36%)
TM helix 2 39..64 CDD:320109 8/24 (33%)
TM helix 3 83..113 CDD:320109 11/36 (31%)
TM helix 4 125..145 CDD:320109 2/19 (11%)
TM helix 5 175..200 CDD:320109 8/105 (8%)
TM helix 6 220..250 CDD:320109 9/41 (22%)
TM helix 7 267..292 CDD:320109 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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