DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Proc-R and LOC1274937

DIOPT Version :10

Sequence 1:NP_572183.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_061500481.1 Gene:LOC1274937 / 1274937 VectorBaseID:AGAMI1_003035 Length:427 Species:Anopheles gambiae


Alignment Length:576 Identity:126/576 - (21%)
Similarity:196/576 - (34%) Gaps:234/576 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSTSTATATSTATATLDEANATVGEMFSD--ADMAEVRHVVQRILVPCVFVIGLLGNSVSIYVLT 66
            ::.||||     ||.|    ...|:...|  ...|:...:|  .|:.|:|  |.:.|:::|.|||
Mosquito    27 ANISTAT-----TAHL----LYCGKALDDFHTSYAKAHGIV--CLLVCIF--GSIANTLNIVVLT 78

  Fly    67 RKRMRCTTNIYLTALAITDIAYLTCQLILSLQHYDYPK--------YHFKLYWQLYGYFVWLCDS 123
            |:.||..||..||.|||.|:..:...:..::....|.:        |.:..|...:..|..:|.:
Mosquito    79 RREMRSPTNAILTGLAIADLLVMLDYMPYAINSIPYLRLSREERLTYGWAWYIMFHSIFAQICHT 143

  Fly   124 FGYISIYIAVCFTIERFIAIRYPLKRQTFCTESLAKKVIAAVAIFCLLSTLSTAFEHTITIGTRQ 188
               |||::.|...|.|:||:.||.:.:.:|..|   |.:||                        
Mosquito   144 ---ISIWLTVTLAIWRYIAVAYPQRNRQWCDMS---KTLAA------------------------ 178

  Fly   189 IDDAYQPCNQTVANISPMPPPPVAVTPPLATPPLPTPATIWQSPDSAMESTTSGSSNQLVDWGSG 253
            |..:|..|                       |.|..|..:..|..|.:|..              
Mosquito   179 IFSSYVVC-----------------------PFLAVPIYLSFSIQSNVELL-------------- 206

  Fly   254 SGDGEPENIPRHRRHWQSSGFVTLPTLRKTLEEQDQKVADAAQRSGVTESLLQLWRRKRSAENHN 318
            ..||                                                            |
Mosquito   207 GCDG------------------------------------------------------------N 211

  Fly   319 INNTDAFAFNVTEYCQNVTYYNHGLSELGYDE---------LYSYLWNLFTLLVFVVFPLLLLAT 374
            ....||.. ||:: .:|||.|..|.|:|..|.         :||        :||.:.|.:.|..
Mosquito   212 TLTPDAIG-NVSQ-GRNVTLYRLGTSQLVRDNPALLNVNFWIYS--------VVFKLIPCIALTI 266

  Fly   375 FNSILILLVHRSKNLRGDLTNASSIRRTKRKSNSGLKGSV----------------SQENRVTIT 423
            .:..||..:..:|..|..||..:          :|||..|                .|.:|.|..
Mosquito   267 LSLRLIGALLEAKQRRSQLTGTA----------TGLKQIVDGRVVDAKAGKQTDKEKQTDRTTRM 321

  Fly   424 LIAVVLMFIVCQLPWAIY----------LIVNQYMEIQIGTQVVAGNVCNLLASLHAASNFFLYC 478
            |:||:|:|::.:.|..|.          ...|.|:::        |:|.::||.:::|.||.|||
Mosquito   322 LLAVLLLFLITEFPQGILGLLSAVLKKDFFFNCYLKL--------GDVMDVLALVNSAINFILYC 378

  Fly   479 VLSDKYRKTVRELITGYRYRRRHARNNTSLYVPH--------------TTTTLTQI 520
            .:|.::|.|..:|     :|.|..  :..:.||.              .||.:|||
Mosquito   379 SMSRQFRSTFNDL-----FRPRIL--DRWMAVPQGDDEQAGRGQHQDAATTQITQI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_572183.1 7tmA_FMRFamide_R-like 41..488 CDD:410630 105/489 (21%)
TM helix 1 42..68 CDD:410630 10/25 (40%)
TM helix 2 74..99 CDD:410630 8/24 (33%)
TM helix 3 114..144 CDD:410630 10/29 (34%)
TM helix 4 156..176 CDD:410630 4/19 (21%)
TM helix 5 351..378 CDD:410630 6/26 (23%)
TM helix 6 415..445 CDD:410630 10/39 (26%)
TM helix 7 456..481 CDD:410630 10/24 (42%)
LOC1274937XP_061500481.1 None

Return to query results.
Submit another query.