DRSC/TRiP Functional Genomics Resources

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Protein Alignment Proc-R and mlnr

DIOPT Version :10

Sequence 1:NP_572183.1 Gene:Proc-R / 31408 FlyBaseID:FBgn0029723 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_002935793.1 Gene:mlnr / 100492328 XenbaseID:XB-GENE-940650 Length:364 Species:Xenopus tropicalis


Alignment Length:91 Identity:21/91 - (23%)
Similarity:32/91 - (35%) Gaps:38/91 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NFLRGLLEDDSHSDLITWSNKDTLEFQMLKPHKVAEL-----------------WGAATGNPGMN 63
            |::..|::::|         |:......::|.||.:.                 |..|.||..: 
 Frog    65 NYMYLLIDEES---------KEAAIVDPVQPQKVVDAVKKHGVKLTTVLTTHHHWDHAGGNEKL- 119

  Fly    64 YDKMSRGLRYFYTNNTLKKVKGKDSR 89
             .||..||          ||.|.|||
 Frog   120 -VKMVSGL----------KVYGGDSR 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Proc-RNP_572183.1 7tmA_FMRFamide_R-like 41..488 CDD:410630 17/66 (26%)
TM helix 1 42..68 CDD:410630 8/42 (19%)
TM helix 2 74..99 CDD:410630 6/16 (38%)
TM helix 3 114..144 CDD:410630
TM helix 4 156..176 CDD:410630
TM helix 5 351..378 CDD:410630
TM helix 6 415..445 CDD:410630
TM helix 7 456..481 CDD:410630
mlnrXP_002935793.1 7tmA_motilin_R 36..325 CDD:320260 21/91 (23%)
TM helix 1 36..63 CDD:320260
TM helix 2 70..95 CDD:320260 6/33 (18%)
TM helix 3 108..138 CDD:320260 14/39 (36%)
TM helix 4 150..172 CDD:320260
TM helix 5 203..232 CDD:320260
TM helix 6 250..280 CDD:320260
TM helix 7 293..318 CDD:320260
Blue background indicates that the domain is not in the aligned region.

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