DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7024 and pdha1

DIOPT Version :9

Sequence 1:NP_572182.1 Gene:CG7024 / 31407 FlyBaseID:FBgn0029722 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_012812481.1 Gene:pdha1 / 549826 XenbaseID:XB-GENE-952669 Length:400 Species:Xenopus tropicalis


Alignment Length:349 Identity:192/349 - (55%)
Similarity:240/349 - (68%) Gaps:6/349 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ENTF---KC--YDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQ 99
            |.||   ||  :.||.||.....|:||..|..|..|..:||.|..:...||::.||||||||:||
 Frog    43 EATFDIKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQ 107

  Fly   100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHMYSDKFYG 164
            ||..||::..:...|.:|||||.|.::|..|||:.||:|||.|.|.||::|||||||||:..|||
 Frog   108 EACCVGLEAAINPTDHLITAYRAHGYSYTRGVSVKEILAELTGRRGGCAKGKGGSMHMYAKNFYG 172

  Fly   165 GNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQGQIFESFNMAKLWCLPCIFVCENNHY 229
            |||||||||||||||.||..:...:.:.|.||||||||||||||::|||.||.|||||:||||.|
 Frog   173 GNGIVGAQVPLGAGIALACKFFGKDEICVALYGDGAANQGQIFETYNMAALWKLPCIFICENNRY 237

  Fly   230 GMGTHVKRASAMTEFYMRGQYIPGLWVDGNQVLAVRSATQFAVDHALK-HGPIVLEMSTYRYVGH 293
            ||||.|:||:|.|::|.||.|||||.|||..||.||.|||||.||... .|||::|:.||||.||
 Frog   238 GMGTSVERAAASTDYYKRGDYIPGLRVDGMDVLCVREATQFAADHCRSGKGPILMELQTYRYHGH 302

  Fly   294 SMSDPGTSYRSREEVQSTREKRDPITSFRSQIIALCLADEEELKALDDKTRKQVDSICKKATTDR 358
            ||||||.|||:|||:|..|.|.||||..:.:::...|:..||||.:|.:.||:::...:.||||.
 Frog   303 SMSDPGVSYRTREEIQEVRSKSDPITLLKDRMLNNNLSSVEELKEIDVEVRKEIEEAAQFATTDP 367

  Fly   359 EVELDELHTDIYAKNVDGKIRGVS 382
            |..|:|:...||.......:||.:
 Frog   368 EPPLEEIANHIYNNEPTFDVRGAN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7024NP_572182.1 TPP_enzymes 37..381 CDD:294952 191/346 (55%)
pdha1XP_012812481.1 PDH_E1_alph_y 68..379 CDD:274473 178/310 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D318981at33208
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X926
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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