DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7024 and pdha1

DIOPT Version :10

Sequence 1:NP_572182.1 Gene:CG7024 / 31407 FlyBaseID:FBgn0029722 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_012812481.1 Gene:pdha1 / 549826 XenbaseID:XB-GENE-952669 Length:400 Species:Xenopus tropicalis


Alignment Length:349 Identity:192/349 - (55%)
Similarity:240/349 - (68%) Gaps:6/349 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ENTF---KC--YDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQ 99
            |.||   ||  :.||.||.....|:||..|..|..|..:||.|..:...||::.||||||||:||
 Frog    43 EATFDIKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQ 107

  Fly   100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHMYSDKFYG 164
            ||..||::..:...|.:|||||.|.::|..|||:.||:|||.|.|.||::|||||||||:..|||
 Frog   108 EACCVGLEAAINPTDHLITAYRAHGYSYTRGVSVKEILAELTGRRGGCAKGKGGSMHMYAKNFYG 172

  Fly   165 GNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQGQIFESFNMAKLWCLPCIFVCENNHY 229
            |||||||||||||||.||..:...:.:.|.||||||||||||||::|||.||.|||||:||||.|
 Frog   173 GNGIVGAQVPLGAGIALACKFFGKDEICVALYGDGAANQGQIFETYNMAALWKLPCIFICENNRY 237

  Fly   230 GMGTHVKRASAMTEFYMRGQYIPGLWVDGNQVLAVRSATQFAVDHALK-HGPIVLEMSTYRYVGH 293
            ||||.|:||:|.|::|.||.|||||.|||..||.||.|||||.||... .|||::|:.||||.||
 Frog   238 GMGTSVERAAASTDYYKRGDYIPGLRVDGMDVLCVREATQFAADHCRSGKGPILMELQTYRYHGH 302

  Fly   294 SMSDPGTSYRSREEVQSTREKRDPITSFRSQIIALCLADEEELKALDDKTRKQVDSICKKATTDR 358
            ||||||.|||:|||:|..|.|.||||..:.:::...|:..||||.:|.:.||:::...:.||||.
 Frog   303 SMSDPGVSYRTREEIQEVRSKSDPITLLKDRMLNNNLSSVEELKEIDVEVRKEIEEAAQFATTDP 367

  Fly   359 EVELDELHTDIYAKNVDGKIRGVS 382
            |..|:|:...||.......:||.:
 Frog   368 EPPLEEIANHIYNNEPTFDVRGAN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7024NP_572182.1 TPP_enzymes 37..381 CDD:470272 191/346 (55%)
pdha1XP_012812481.1 PDH_E1_alph_y 68..379 CDD:274473 178/310 (57%)

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