DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7024 and pdha1a

DIOPT Version :9

Sequence 1:NP_572182.1 Gene:CG7024 / 31407 FlyBaseID:FBgn0029722 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_005165191.1 Gene:pdha1a / 406702 ZFINID:ZDB-GENE-040426-2719 Length:400 Species:Danio rerio


Alignment Length:375 Identity:191/375 - (50%)
Similarity:254/375 - (67%) Gaps:8/375 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SGAHSILERNMLCRIIGRHKCSCLTLENTF---KC--YDLENGPTMDVELSREDALTMYTQMLEL 73
            :||..:.|...:  ::.....:..|.:.||   ||  :.||.||.:...|:||:.|..|..|..:
Zfish    19 NGAELVSEGARI--VVSARTYADFTPQATFDIKKCDVHKLEEGPAVQAVLTREEGLQYYRTMQTM 81

  Fly    74 RRFETVAGNYYKERKIRGFCHLYNGQEAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMA 138
            ||.|..|...||::.||||||||:||||.|||::..:...|.:|||||.|.:|...|.::.||||
Zfish    82 RRMELKADQLYKQKIIRGFCHLYDGQEACAVGIEAGINLSDHLITAYRAHGYTLTRGGTVREIMA 146

  Fly   139 ELFGVRTGCSRGKGGSMHMYSDKFYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQ 203
            ||.|.|.|.::|||||||||:..|||||||||||||||||:.||..|:..|.:.|.|||||||||
Zfish   147 ELTGRRGGIAKGKGGSMHMYTKHFYGGNGIVGAQVPLGAGVALACKYQGKNELCVCLYGDGAANQ 211

  Fly   204 GQIFESFNMAKLWCLPCIFVCENNHYGMGTHVKRASAMTEFYMRGQYIPGLWVDGNQVLAVRSAT 268
            |||||::|||.||.|||||:||||.|||||.|:||:|.|::|.||.:||||.|||..||.||.||
Zfish   212 GQIFETYNMASLWKLPCIFICENNKYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDVLCVREAT 276

  Fly   269 QFAVDHALK-HGPIVLEMSTYRYVGHSMSDPGTSYRSREEVQSTREKRDPITSFRSQIIALCLAD 332
            :||.:|... .|||::|:.||||.||||||||.|||:|||:|..|.|.|||:..:.::::..:|.
Zfish   277 KFAAEHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPISLLKDRMLSNNMAS 341

  Fly   333 EEELKALDDKTRKQVDSICKKATTDREVELDELHTDIYAKNVDGKIRGVS 382
            .||||.:|.:.||:::...:.||||.|..|::|...|:..:...::||.:
Zfish   342 VEELKEIDVEVRKEIEDAAQFATTDPEPPLEDLCNHIFYNDPPLEVRGTN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7024NP_572182.1 TPP_enzymes 37..381 CDD:294952 187/349 (54%)
pdha1aXP_005165191.1 PDH_E1_alph_y 68..379 CDD:274473 175/310 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576770
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54057
OrthoDB 1 1.010 - - D318981at33208
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100754
Panther 1 1.100 - - LDO PTHR11516
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X926
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.720

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