DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and PRS2

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_011025.3 Gene:PRS2 / 856836 SGDID:S000000901 Length:318 Species:Saccharomyces cerevisiae


Alignment Length:118 Identity:19/118 - (16%)
Similarity:40/118 - (33%) Gaps:26/118 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IIVKQLQKRCHNNNNNNIIISGCRILSNNNNNSSIDIIRNGRYSSSFFGLFQNAAQAGVSKTNNY 77
            :::..:...|      ..::..|..|.::.....|.|:.:|.:|.|......|:..:.:..||..
Yeast   220 LLIDDMADTC------GTLVKACDTLMDHGAKEVIAIVTHGIFSGSAREKLINSRLSRIVCTNTV 278

  Fly    78 ATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLY 130
            ..:..:.:     :.::|..|               |..:.||||.......|
Yeast   279 PVDLDLDI-----VDQVDISP---------------TIAEAIRRLHNGESVSY 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 8/53 (15%)
PRS2NP_011025.3 PrsA 2..314 CDD:223538 19/118 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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