DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdha and PRS1

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_012740.1 Gene:PRS1 / 853654 SGDID:S000001664 Length:427 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:66/353 - (18%)
Similarity:114/353 - (32%) Gaps:112/353 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPS--GVLAELTGVQGGCARGKGGSMHMYA 205
            :|:.:..:|:  ::||.|..:          :...|||  ..:.||..:...|..|....:....
Yeast    37 NGETSVQIGV--SVRDEDVYV----------IQSGSPSINDDIMELLILVSACRGGSARKITAVI 89

  Fly   206 PNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLA------LYGDGAANQGQV-FEAYNMAYLWK 263
            |.|           |...    .||.|.:.|...|      |...||.:...: ..|..|...:.
Yeast    90 PQF-----------PYSK----QCKMKRHRGAITARMLANLLVMAGADHVVSMDLHASQMQGFFT 139

  Fly   264 LPVIFVCENNNYGMGTSSERASCNTDYYTRGDAL-----PGIWVDGMDVLAVRSATEFA----IN 319
            .||     :|.||..:.::....|.:.|.  ||:     ||         ..:..|..|    ||
Yeast   140 KPV-----DNLYGGPSLAKWIRENVEDYE--DAVVVSKNPG---------GTKRVTALADSLKIN 188

  Fly   320 YVNTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKA 384
            :...|        |.|.....:      |...:::|:::.::..:.......|..|....:|...
Yeast   189 FAMIH--------TDRRRSKDL------YSQNKDLQQLKLRKQSMLRKNRPIIRQGDHPNEEENI 239

  Fly   385 I------DLKVR--------KEVDEATAFAKSDAEL---------GVSHLWTDVYSNNLEP---- 422
            |      ..::|        :..|:..|..:||:||         |:...:..|.|.:.|.    
Yeast   240 ILSNGIQTARIRNGHVIGDDEADDDEDAILESDSELHSIDGLDSHGLGGTYDAVDSEDEEEIPVL 304

  Fly   423 ----------KLRGTIAYDIDHIQERKG 440
                      .:||..|..:|.:.:|.|
Yeast   305 YREQLITLVGNVRGRSAIILDDMIDRPG 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 60/337 (18%)
PRS1NP_012740.1 PrsA 1..422 CDD:223538 66/353 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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