DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdha and PRS4

DIOPT Version :10

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_009485.3 Gene:PRS4 / 852211 SGDID:S000000164 Length:326 Species:Saccharomyces cerevisiae


Alignment Length:436 Identity:79/436 - (18%)
Similarity:134/436 - (30%) Gaps:170/436 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PIIVKQLQKRCHNNNNNNIIISGCRILSNNNNNSSIDIIRNGRYSSSFFGLFQNAAQAGV--SKT 74
            |.:.:|:.|:.      .|.:|...:...:|..:|:.|..:.|....:.      .|.|:  .:.
Yeast    23 PDLAEQISKKL------GIPLSKVGVYQYSNKETSVTIGESLRDEDVYI------IQTGIGEQEI 75

  Fly    75 NNYATE----------------ATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLE 123
            |::..|                .||..|.|:.  |.|:         ||::....|.......|:
Yeast    76 NDFLMELLILIHACKIASARKITTVIPNFPYA--RQDK---------KDKSRAPITAKLVANLLQ 129

  Fly   124 TAAG------NLYKEKIIRGFCH-----LYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGV 177
            ||..      :|:..: |:||.|     ||:  |...:.......|.||.|.            |
Yeast   130 TAGADHVITMDLHASQ-IQGFFHIPVDNLYA--EPSVLNYIRTKTDFDNAIL------------V 179

  Fly   178 SPSGVLAELTGVQGGCARGKGGSMHMYAPNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALY 242
            ||..                ||:..:.|         :..::.|...:....:.|.|....:.|.
Yeast   180 SPDA----------------GGAKRVAA---------LADKLDLNFALIHKERQKANEVSKMVLV 219

  Fly   243 GDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDALPGIWVDGMDV 307
            ||          ..|.:.|....:...|                            |..|...|.
Yeast   220 GD----------VTNKSCLLVDDMADTC----------------------------GTLVKACDT 246

  Fly   308 LAVRSATEFAINYVNTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 372
            |....|.|  :..:.|||         .:||.:          ||:::..|..|           
Yeast   247 LMEHGAKE--VIAIVTHG---------IFSGSA----------REKLRNSRLSR----------- 279

  Fly   373 ELGLITTDEVKA-IDLKVRKEVDEATAFAKSDAEL----GVSHLWT 413
               ::.|:.|.. :||.:..::|.:..||::...|    .||:|:|
Yeast   280 ---IVCTNTVPVDLDLPIADQIDISPTFAEAIRRLHNGESVSYLFT 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:470272 67/368 (18%)
PRS4NP_009485.3 PrsA 12..321 CDD:440230 77/433 (18%)

Return to query results.
Submit another query.