DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and E1 ALPHA

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_176198.1 Gene:E1 ALPHA / 842284 AraportID:AT1G59900 Length:389 Species:Arabidopsis thaliana


Alignment Length:365 Identity:182/365 - (49%)
Similarity:238/365 - (65%) Gaps:12/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYS 143
            |..|::.:.||..|..|. |:..|:.:..:.|.::..|..:||:|.||.:|||.|:||||||||.
plant    30 TPITIETSLPFTAHLCDP-PSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYD 93

  Fly   144 GQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMY--AP 206
            ||||.|:||:||:...|.||:|||.|......|.|...|.:||.|.|.||::|||||||.|  ..
plant    94 GQEAVAIGMEAAITKKDAIITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKES 158

  Fly   207 NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCE 271
            :||||:||||||||||.|:..|.||.....:..||||||||||||:|||.|::.||.||.|.|||
plant   159 SFYGGHGIVGAQVPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCE 223

  Fly   272 NNNYGMGTSSERASCNTDYYTRGDALPGIWVDGMDVLAVRSATEFAINYVNTHGPLVMETNTYRY 336
            ||:|||||:..||:.:..||.|||.:||:.|||||..||:.|.:||..:....||:::|.:||||
plant   224 NNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDAFAVKQACKFAKQHALEKGPIILEMDTYRY 288

  Fly   337 SGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEATAFAK 401
            .||||||||::||||:||..|||:||||...|:|.:...|.|..|:|.::.::|||||:|.|.||
plant   289 HGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAK 353

  Fly   402 SDAELGVSHLWTDVYSNNLEPKLRGTIAYDIDHIQERKGV 441
            .......|.|:|:||....     ||.::..|    ||.|
plant   354 DCPMPEPSELFTNVYVKGF-----GTESFGPD----RKEV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 176/348 (51%)
E1 ALPHANP_176198.1 PLN02269 28..389 CDD:215152 182/365 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 324 1.000 Domainoid score I270
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I637
OMA 1 1.010 - - QHG54057
OrthoDB 1 1.010 - - D871160at2759
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 1 1.000 - - mtm1206
orthoMCL 1 0.900 - - OOG6_100754
Panther 1 1.100 - - O PTHR11516
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X926
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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