DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and IAR4

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_173828.1 Gene:IAR4 / 839031 AraportID:AT1G24180 Length:393 Species:Arabidopsis thaliana


Alignment Length:337 Identity:168/337 - (49%)
Similarity:230/337 - (68%) Gaps:3/337 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 TVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQE 146
            |::...||..| |.|.|:..|:.:.::.|.::..|..:||:|.||.:|||.|:||||||||.|||
plant    37 TIETAVPFTSH-LCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQE 100

  Fly   147 ACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYA--PNFY 209
            |.||||:||:...|.||::||.|......|.......:||.|.:.||:.|||||||.|.  .:||
plant   101 ALAVGMEAAITKKDAIITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFY 165

  Fly   210 GGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNN 274
            ||:||||||:|||.|:..|.||..:..:..||||||||||||:|||.|::.||.||.|.|||||:
plant   166 GGHGIVGAQIPLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNH 230

  Fly   275 YGMGTSSERASCNTDYYTRGDALPGIWVDGMDVLAVRSATEFAINYVNTHGPLVMETNTYRYSGH 339
            |||||::.|::.:..|:.|||.:||:.|||||.|||:.|.:||..:...:||:::|.:||||.||
plant   231 YGMGTATWRSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGH 295

  Fly   340 SMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEATAFAKSDA 404
            ||||||::||||:||..|||.||||...::|.:...:.|..|:|.::.::|||||:|.|.||...
plant   296 SMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESP 360

  Fly   405 ELGVSHLWTDVY 416
            ....|.|:|::|
plant   361 IPDASELFTNMY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 168/337 (50%)
IAR4NP_173828.1 PLN02269 32..393 CDD:215152 168/337 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 324 1.000 Domainoid score I270
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I637
OMA 1 1.010 - - QHG54057
OrthoDB 1 1.010 - - D871160at2759
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 1 1.000 - - mtm1206
orthoMCL 1 0.900 - - OOG6_100754
Panther 1 1.100 - - O PTHR11516
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X926
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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