DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and Prpsap1

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_071990.2 Gene:Prpsap1 / 64390 RGDID:620206 Length:385 Species:Rattus norvegicus


Alignment Length:122 Identity:29/122 - (23%)
Similarity:52/122 - (42%) Gaps:27/122 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 GHSMSDPGTSYRTREEIQE-VRQK---------RDPITSFKELCIELGLITTDEVKAI------- 385
            |.|:....|:..||.||:| ||.:         ||..|:..||.|....:.|...:.|       
  Rat    64 GKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYF 128

  Fly   386 ----DLKVRKEVD-EATAFAKSDAELGVSHLWT-DVYSNNLEPKLRGTIAYDIDHIQ 436
                ..|:||... .....|...|:.|::|:.| |::    :.:::|...:.:|:::
  Rat   129 PYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLH----QKEIQGFFCFPVDNLR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 27/110 (25%)
Prpsap1NP_071990.2 Pribosyltran_N 38..155 CDD:404648 23/90 (26%)
Pribosyl_synth 196..379 CDD:405288
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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