DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and PDHA1

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001166925.1 Gene:PDHA1 / 5160 HGNCID:8806 Length:428 Species:Homo sapiens


Alignment Length:427 Identity:228/427 - (53%)
Similarity:291/427 - (68%) Gaps:14/427 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRTLSRVSELPIIVKQLQKRCHNNNNNNIIISGCRILSNNNNNSSIDIIRNGRYSSSFFGLFQN 65
            ||..:|||     :....||..|.......::|    :|....:|.:.:.:...||.|   |...
Human     4 MLAAVSRV-----LSGASQKPRHGLATLPSLVS----ISRLKQSSHLGLPKCWDYSHS---LKTR 56

  Fly    66 AAQAGVSKTNNYATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLY 130
            .|...:..:.|:|.:||.::.: ..||||:|||.....||::..||||..|||:||:|..|..||
Human    57 QASRVLVASRNFANDATFEIKK-CDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLY 120

  Fly   131 KEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCAR 195
            |:|||||||||..|||||.||::|.:...|::|:|||.||:|:..|:|...:||||||.:||||:
Human   121 KQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAK 185

  Fly   196 GKGGSMHMYAPNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAY 260
            ||||||||||.||||||||||||||||||:.|||||.|...:||.|||||||||||:|||||||.
Human   186 GKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAA 250

  Fly   261 LWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDALPGIWVDGMDVLAVRSATEFAINYVNT-H 324
            |||||.||:||||.||||||.|||:.:||||.|||.:||:.|||||:|.||.||.||..|..: .
Human   251 LWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 315

  Fly   325 GPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKV 389
            ||::||..||||.||||||||.||||||||||||.|.|||...|:..:...|.:.:|:|.||::|
Human   316 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEV 380

  Fly   390 RKEVDEATAFAKSDAELGVSHLWTDVYSNNLEPKLRG 426
            |||:::|..||.:|.|..:..|...:||::...::||
Human   381 RKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRG 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 209/348 (60%)
PDHA1NP_001166925.1 PDH_E1_alph_y 96..408 CDD:274473 195/311 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143840
Domainoid 1 1.000 403 1.000 Domainoid score I724
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 445 1.000 Inparanoid score I1648
Isobase 1 0.950 - 0 Normalized mean entropy S510
OMA 1 1.010 - - QHG54057
OrthoDB 1 1.010 - - D318981at33208
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 1 1.000 - - mtm8483
orthoMCL 1 0.900 - - OOG6_100754
Panther 1 1.100 - - O PTHR11516
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2211
SonicParanoid 1 1.000 - - X926
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.750

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