DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and CG2246

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001189321.1 Gene:CG2246 / 43637 FlyBaseID:FBgn0039790 Length:406 Species:Drosophila melanogaster


Alignment Length:89 Identity:18/89 - (20%)
Similarity:28/89 - (31%) Gaps:31/89 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KRCH----NNNNNNIII---------------------SGCRILSNNNNNSSIDIIRNGRYSSSF 59
            |||.    |.:.::|:|                     .||.:...:|..:.::|      |.|.
  Fly    15 KRCRSDMDNTSTSDIVIINGNSHPDLANMVAERMGIKNGGCSVFHKSNRETIVEI------SDSV 73

  Fly    60 FGLFQNAAQAGVSKTNNYATEATV 83
            .|......|.|....||...|..:
  Fly    74 RGKDIYIIQTGTKDANNNIMELLI 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 1/6 (17%)
CG2246NP_001189321.1 PrsA 25..400 CDD:223538 14/79 (18%)
Pribosyltran_N 29..144 CDD:290508 14/75 (19%)
Pribosyl_synth 185..400 CDD:291252
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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