DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha and prpsap2

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_998661.1 Gene:prpsap2 / 406369 ZFINID:ZDB-GENE-040426-2077 Length:357 Species:Danio rerio


Alignment Length:114 Identity:22/114 - (19%)
Similarity:46/114 - (40%) Gaps:18/114 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 RYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAID--LKVRKEVDEAT 397
            |:|..::.:.|..:.:.|....:.:::.|||...::...:.:|..|.:..:|  |...:.:.|..
Zfish   213 RHSPPTVKNIGAIHPSLEIPLLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERG 277

  Fly   398 AF----------AKSDAELGVSHLWTDVYSNNLEPKLRGTIAYDIDHIQ 436
            |:          ..|||...:.....|      |..:..||.::|..:|
Zfish   278 AYKIFVMATHGILSSDAPRLIEESAID------EVVVTNTIPHEIQKLQ 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 18/102 (18%)
prpsap2NP_998661.1 PrsA 6..351 CDD:223538 22/114 (19%)
Pribosyltran_N 8..126 CDD:290508
Pribosyl_synth 167..351 CDD:291252 22/114 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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