DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdha and Prps2

DIOPT Version :9

Sequence 1:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_036017671.1 Gene:Prps2 / 110639 MGIID:97776 Length:469 Species:Mus musculus


Alignment Length:218 Identity:53/218 - (24%)
Similarity:77/218 - (35%) Gaps:56/218 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 ARGKGGSM---HMYAPNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCL---ALYGDGAANQGQV 252
            |.|:.|::   |..|.|  ||.|......|......|..:   |...|:   ||:|..|....| 
Mouse    95 ASGRVGAVCGHHFGAGN--GGGGETSVDPPAPVSNSLPDR---NPESCMVEKALHGSWALGLSQ- 153

  Fly   253 FEAYNMAYLWKLPVIFVCENNNYGM-----GTSSERASCNTD--YYTRGDALP-------GIWVD 303
                                .|:.|     |..| .|||:.|  ....|.|||       |..|.
Mouse   154 --------------------GNFRMPLPAAGDQS-TASCSGDSPEQQAGQALPYPESVEIGESVR 197

  Fly   304 GMDVLAVRSAT-EFAINYVNTHGPLVMETNTYRYSGHSMSD---PGTSYRTREEIQEVRQKRDPI 364
            |.||..::|.. |...|.:.    |::..|..:.:..|...   |...|..:::..:|.:.|.||
Mouse   198 GEDVYIIQSGCGEINDNLME----LLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPI 258

  Fly   365 TSFKELCIELGLITTDEVKAIDL 387
             |.|.:...|.:...|.:..:||
Mouse   259 -SAKLVANMLSVAGADHIITMDL 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:294952 53/218 (24%)
Prps2XP_036017671.1 PrsA 189..464 CDD:223538 23/97 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.