DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctp and Dnal4

DIOPT Version :9

Sequence 1:NP_001356933.1 Gene:ctp / 31405 FlyBaseID:FBgn0011760 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_059498.2 Gene:Dnal4 / 54152 MGIID:1859217 Length:105 Species:Mus musculus


Alignment Length:83 Identity:28/83 - (33%)
Similarity:52/83 - (62%) Gaps:2/83 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VIKNADMSEEMQQDAVDCATQALEKY-NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET 70
            :::::||.|||:.:.::....|.||: |..:..|..||:..|||:..:||.::|..||..:|||.
Mouse    21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEV 85

  Fly    71 RHFIYFYL-GQVAILLFK 87
            ::.:|.|. |.:|:.::|
Mouse    86 KNLLYLYFGGTLAVCVWK 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctpNP_001356933.1 PTZ00059 1..89 CDD:185421 28/83 (34%)
Dnal4NP_059498.2 DLC-like_DNAL4 21..103 CDD:412001 27/81 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3430
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1520814at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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