DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctp and AT1G52245

DIOPT Version :9

Sequence 1:NP_001356933.1 Gene:ctp / 31405 FlyBaseID:FBgn0011760 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001154419.1 Gene:AT1G52245 / 28717345 AraportID:AT1G52245 Length:94 Species:Arabidopsis thaliana


Alignment Length:93 Identity:39/93 - (41%)
Similarity:60/93 - (64%) Gaps:2/93 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIVGRNFG 63
            |.:.||:::::||..:||..|:..|:|||:.:::.  |.||.:||||||::|...|.|:||.|||
plant     1 MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNFG 65

  Fly    64 SYVTHETRHFIYFYLGQVAILLFKSGXS 91
            .:.||....||||.|..:..|:||.. :
plant    66 CFFTHSKGTFIYFQLETLKFLIFKGAST 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctpNP_001356933.1 PTZ00059 1..89 CDD:185421 39/89 (44%)
AT1G52245NP_001154419.1 Dynein_light 5..89 CDD:395977 36/83 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1520814at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11886
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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