DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctp and LOC100363141

DIOPT Version :9

Sequence 1:NP_001356933.1 Gene:ctp / 31405 FlyBaseID:FBgn0011760 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_002729988.1 Gene:LOC100363141 / 100363141 RGDID:2324749 Length:87 Species:Rattus norvegicus


Alignment Length:85 Identity:56/85 - (65%)
Similarity:66/85 - (77%) Gaps:2/85 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHE 69
            ||.||:|||.||.|||:|:||||..:  ::|:|..|:.|||||.|||.|||||||.|....||:|
  Rat     5 KAAIKHADMLEETQQDSVECATQTQD--SVEEDFVAHSKKEFDNKYNCTWHCIVGWNVSGCVTYE 67

  Fly    70 TRHFIYFYLGQVAILLFKSG 89
            |:||||||||||||.||.||
  Rat    68 TKHFIYFYLGQVAIFLFISG 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctpNP_001356933.1 PTZ00059 1..89 CDD:185421 54/83 (65%)
LOC100363141XP_002729988.1 Dynein_light 5..87 CDD:295682 54/83 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353086
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53822
OrthoDB 1 1.010 - - D1520814at2759
OrthoFinder 1 1.000 - - FOG0001307
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101264
Panther 1 1.100 - - O PTHR11886
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X523
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

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