DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2C1 and PTC2

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_011013.1 Gene:PTC2 / 856823 SGDID:S000000891 Length:464 Species:Saccharomyces cerevisiae


Alignment Length:492 Identity:115/492 - (23%)
Similarity:191/492 - (38%) Gaps:141/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 SNSNSSSSSNSNSSSSSATGSSASTGNPSPCSSLGVNMRVTGQCCQGGRKYMEDQFSVAYQESPI 283
            ||......|:|.:.|.:|.|..|                     .||.|..|||           
Yeast     6 SNPVIDKESHSGADSLTAFGLCA---------------------MQGWRMSMED----------- 38

  Fly   284 THELE-----------YAFFGIYDGHGGPEAALFAKEHLMLEIVKQKQFWSDQDEDVLRAIREGY 337
            :|.||           .||:||:|||||.:.|.:....::..:.:||.|   .:.::.||:.:.:
Yeast    39 SHILEPNVLTKSDKDHIAFYGIFDGHGGAKVAEYCGNKIVEILQEQKSF---HEGNLPRALIDTF 100

  Fly   338 IATHFAMWREQEKWPRTANGHLSTAGTTATVAFMRREK--IYIGHVGDSGIVLGYQNKGERNWRA 400
            |.|...:.::    |.....|   :|.|||...:.:.:  :..|:.|||..||.      .:..|
Yeast   101 INTDVKLLQD----PVMKEDH---SGCTATSILVSKSQNLLVCGNAGDSRTVLA------TDGNA 152

  Fly   401 RPLTTDHKPESLAEKTRIQRSGGNVAIKSGVPRVVWNRPRDPMHRGPIRRRTLVDEIPFLAVARS 465
            :.|:.||||...:||:||..:.|.|.    :.||..|                      ||::|:
Yeast   153 KALSYDHKPTLASEKSRIVAADGFVE----MDRVNGN----------------------LALSRA 191

  Fly   466 LGDLWSYNSRFK----EFVVSPDPDVKVVKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEHLI 526
            :|| :.:.|..|    |.:|:..||:....::......:|...||:|:.:|:|:.||.|......
Yeast   192 IGD-FEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVHLGLRE 255

  Fly   527 GEILNEQDVMNPSKALVDQ-ALKTWAAKKMRADNTSVVTVIL----------TPAARNNSPTTPT 580
            |:.|||     .|..::|. ...|.....:..||.|:|.|.|          :...::.:..|..
Yeast   256 GKTLNE-----ISSRIIDVCCAPTTEGTGIGCDNMSIVVVALLKEGEDVAQWSDRMKSKAHRTSV 315

  Fly   581 RSPSAMARD----------NDLEVELLLEEDDEELPTLDVENNYPDFLIEEHEYVLDQPYSALAK 635
            ||.:...|.          ||.:|..:..:..::..|.|            ||       :|:|.
Yeast   316 RSFADKRRRVFSYYDFSKCNDEQVFAITTKKPQDKFTRD------------HE-------AAVAS 361

  Fly   636 RHSPPEAFRNFDYFDVDEDELDEDEETVEEDEEEEEE 672
                ..|..|.|..|:|:.:.|.|.|.::...:.:.:
Yeast   362 ----VTAADNDDPMDIDDTDADTDAENLDPSSQSKSK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 85/328 (26%)
PTC2NP_011013.1 PP2C 23..279 CDD:395385 83/335 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.