DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2C1 and AT1G16220

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_173072.1 Gene:AT1G16220 / 838190 AraportID:AT1G16220 Length:491 Species:Arabidopsis thaliana


Alignment Length:587 Identity:123/587 - (20%)
Similarity:209/587 - (35%) Gaps:176/587 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 KKQRLNSATTTTINRSRGGGAAQSRLRRSAAIVPPRSIPESCASSSNSNSSSSSNSNSSSSSATG 238
            |:....|..|||:.|...|     ||||      ||.:             .|....|......|
plant    14 KETGATSTATTTVERQSSG-----RLRR------PRDL-------------YSGGEISEIQQVVG 54

  Fly   239 SSASTGNPSPCSSLGVNMRVTGQCCQGGRKYMEDQFSVAYQESPITHELEYAFFGIYDGHG--GP 301
            .....|          :..:.....|.|:|.......:.::.  .....:....|::||||  |.
plant    55 RLVGNG----------SSEIACLYTQQGKKGTNQDAMLVWEN--FCSRSDTVLCGVFDGHGPFGH 107

  Fly   302 EAALFAKEHLMLEIVKQ------------------------KQFW-----SDQDE----DVLRAI 333
            ..:...::.|...:..|                        ::.|     .::||    ::...:
plant   108 MVSKRVRDMLPFTLSTQLKTTSGTEQSSSKNGLNSAPTCVDEEQWCELQLCEKDEKLFPEMYLPL 172

  Fly   334 REGYIATHFAMWREQEKWPRTANGHLSTAGTTATVAFMRREKIYIGHVGDSGIVLGYQNKGERNW 398
            :...:.|...|.:|.:..| |.|...|  |||:.....:.:.:.:|::|||..||..::: :...
plant   173 KRALLKTCQQMDKELKMHP-TINCFCS--GTTSVTVIKQGKDLVVGNIGDSRAVLATRDQ-DNAL 233

  Fly   399 RARPLTTDHKPESLAEKTRIQRSGGNVAIKSGVPRV--VWNRPRDPMHRGPIRRRTLVDEIPFLA 461
            .|..||.|.||:..:|..||.|..|.|......|.|  ||....|.               |.||
plant   234 VAVQLTIDLKPDLPSESARIHRCKGRVFALQDEPEVARVWLPNSDS---------------PGLA 283

  Fly   462 VARSLGDLWSYNSRFKEFVVSPDPDVKVVKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEHLI 526
            :||:.||..     .|::.:...||:...::.... :.:|..|||:|:|::.:||||.|...   
plant   284 MARAFGDFC-----LKDYGLISVPDINYHRLTERD-QYIILATDGVWDVLSNKEAVDIVASA--- 339

  Fly   527 GEILNEQDVMNPS-----KALVDQALKTWAAK--KMRADNTSVVTVILTPAAR----------NN 574
                       ||     :|:||.|::.|..|  ..:.|:.:||.:.|...:.          |:
plant   340 -----------PSRDTAARAVVDTAVRAWRLKYPTSKNDDCAVVCLFLEDTSAGGTVEVSETVNH 393

  Fly   575 SPTTPTRSPS-AMARDNDLEVELLLEEDDEELPTLDVENNYPDFLIEEHEYVLDQPYSALAKRHS 638
            |....|.|.: ..::|.|.:.| ...|.:|.:|..::                        |...
plant   394 SHEESTESVTITSSKDADKKEE-ASTETNETVPVWEI------------------------KEEK 433

  Fly   639 PPEAFRNFDYFDVDEDELDEDEETVEEDEEEEEEEEETKSVGILQ-QSLFN-PR--------KTW 693
            .||:.|           ::..:.|:.|....:::||.:...|:.: .||.: ||        .:|
plant   434 TPESCR-----------IESKKTTLAECISVKDDEEWSALEGLTRVNSLLSIPRFFSGELRSSSW 487

  Fly   694 RK 695
            ||
plant   488 RK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 79/354 (22%)
AT1G16220NP_173072.1 PP2Cc 64..376 CDD:238083 79/352 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47992
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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