DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2C1 and PP2C52

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001190668.1 Gene:PP2C52 / 827930 AraportID:AT4G03415 Length:468 Species:Arabidopsis thaliana


Alignment Length:535 Identity:113/535 - (21%)
Similarity:183/535 - (34%) Gaps:189/535 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 GSSASTGNPSPCSS------------LGVNMRVTGQCC--------------------------- 263
            |...||.:.|.|||            ||:.      ||                           
plant     2 GGCVSTSSKSTCSSWSNGEKPVRRPYLGIG------CCVSKRAKRTFSDHIVSLQNLTSIPNRIT 60

  Fly   264 ------------QGGRKYMEDQFSVAYQESPITHELEYAFFGIYDGHGGPEAALFAKE------- 309
                        |.|||.:.....:.:::  ...| :..|.|::||| ||...|.|::       
plant    61 SSSKSRSSCIFTQQGRKGINQDAMIVWED--FMSE-DVTFCGVFDGH-GPYGHLVARKVRDTLPV 121

  Fly   310 --HLMLEIVKQKQFWS--------------------DQDEDVLRAI-REGYIATHFAMWREQEKW 351
              ....:.::.||..|                    ..|||.|:.: .|.::.:..||.:|....
plant   122 KLQFFFQTLQSKQNCSKGTRFRRNSSKSAVQEAVKEGSDEDKLKGLWGEAFLKSFKAMDKELRSH 186

  Fly   352 PRTANGHLSTAGTTATVAFMRREKIYIGHVGDSGIVLGYQNKGERNWRARPLTTDHKPESLAEKT 416
            |   |.....:|:|......:...:::|::|||..:||.::..: :..|..||.|.||:...|..
plant   187 P---NLDCFCSGSTGVTILKQGSNLFMGNIGDSRAILGSKDSND-SMVATQLTVDLKPDLPREAE 247

  Fly   417 RIQRSGGNVAIKSGVPRV--VWNRPRDPMHRGPIRRRTLVDEIPFLAVARSLGDLWSYNSRFKEF 479
            ||:|..|.|......|.|  ||               ...|:.|.||:||:.||..     .||:
plant   248 RIKRCKGRVFAMEDEPEVPRVW---------------LPYDDAPGLAMARAFGDFC-----LKEY 292

  Fly   480 VVSPDPDVKVVKINPSTFRCL-------IFGTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVMN 537
                    .|:.:...|.|.|       :..:||:|:|::.:|.||.|         .:.....:
plant   293 --------GVISVPEFTHRVLTDRDQFIVLASDGVWDVLSNEEVVDIV---------ASATSRAS 340

  Fly   538 PSKALVDQALKTWAAK--KMRADNTSVVTVILTPAARNNSPTTPTRSPSAMARDNDLEVELLLEE 600
            .::.||:.|.:.|..|  ..:.|:.:||.:.|                     |..::.|...:|
plant   341 AARTLVNSAAREWKLKYPTSKMDDCAVVCLFL---------------------DGKMDSESDYDE 384

  Fly   601 DDEELPTLDVENNYPDFLIEEHEYVLDQPYSALAKRHSPPEAFRNFDYFDVDEDELDEDEETVEE 665
            ......|..||::                    ..:.|.|...|||..    ....|::.||...
plant   385 QGFSSATNAVESD--------------------DGQRSEPCLQRNFTV----RSSSDQENETYGN 425

  Fly   666 DEEEEEEEEETKSVG 680
            ...|.:.|:| |:||
plant   426 VNTETDAEDE-KTVG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 83/390 (21%)
PP2C52NP_001190668.1 PP2Cc 73..372 CDD:238083 81/343 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47992
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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