DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2C1 and Ppm1f

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_789803.1 Gene:Ppm1f / 68606 MGIID:1918464 Length:452 Species:Mus musculus


Alignment Length:498 Identity:105/498 - (21%)
Similarity:182/498 - (36%) Gaps:113/498 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SSSGNNNNNSACHPALDASSDVVVVE-PAAVGVAQEEEEEPEQRPERISIPIPDLAFTEMEAYAE 156
            |.:..|::..||...:....|..:.: ||.:.:         :.|....:|...|:..|:||...
Mouse     3 SGAAQNSSQMACDSEIPGFLDAFLQDFPAPLSL---------ESPLPWKVPGTVLSQEEVEAELI 58

  Fly   157 DIVVDMEGGSPAKP---LNPKKQRLNSATTTTINRSRGGGAAQSRLRRSAAIVPPRSIPESCASS 218
            ::.:...|...|.|   :....:.::....|.:          |..:|         :||   ..
Mouse    59 ELALGFLGSRNAPPSFAVAVTHEAISQLLQTDL----------SEFKR---------LPE---QE 101

  Fly   219 SNSNSSSSSNSNSSSSSATGSSASTGNP--SPCSSLGVNMRVTGQCCQ-----------GGRKYM 270
            ..........:..:...|.|.:.|..|.  ..||.....:.:|.|..|           ..|:.|
Mouse   102 EEEEEEEEEKALVTLLDAKGLARSFFNCLWKVCSQWQKQVPLTAQAPQWQWLVSIHAIRNTRRKM 166

  Fly   271 EDQ------FSVAYQESPITHELEYAFFGIYDGHGGPEAALFAKEHLMLEIVKQKQFWSDQDEDV 329
            ||:      |:..:..|...|.   |:|.::|||||.:||.:|..|:......|.:..::.    
Mouse   167 EDRHVSLPAFNHLFGLSDSVHR---AYFAVFDGHGGVDAARYASVHVHTNASHQPELRTNP---- 224

  Fly   330 LRAIREGYIATHFAMWREQEKWPRTANGHLSTAGTTATVAFMRREKIYIGHVGDSGIVLGYQNKG 394
            ..|::|.:..|       .|.:.:.|......:|||...|.:....:::..:|||.::|..|.  
Mouse   225 AAALKEAFRLT-------DEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQG-- 280

  Fly   395 ERNWRARPLTTDHKPESLAEKTRIQRSGGNVAIKSGVPRVVWNRPRDPMHRGPIRRRTLVDEIPF 459
                |...|...||||...||.||:..||.|::..     .|.                |:..  
Mouse   281 ----RVVKLMEPHKPERQDEKARIEALGGFVSLMD-----CWR----------------VNGT-- 318

  Fly   460 LAVARSLGDLWSYNSRFKEFVVSPDPDVKVVKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEH 524
            |||:|::||:      |::..||.:.|....::..|. ..|:...||.::||...|....|.   
Mouse   319 LAVSRAIGDV------FQKPYVSGEADAASRELTGSE-DYLLLACDGFFDVVPHHEVTGLVH--- 373

  Fly   525 LIGEILNEQDVMNPSKALVDQALKTWAAKKMRADNTSVVTVIL 567
              |.:|..:.    :...:.:.|...|..:...||.:|:.|.|
Mouse   374 --GHLLRHKG----NGMRIAEELVAVARDRGSHDNITVMVVFL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 77/327 (24%)
Ppm1fNP_789803.1 PP2C 152..403 CDD:366121 71/309 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.