DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp2C1 and Pdp1

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_006237970.1 Gene:Pdp1 / 54705 RGDID:620393 Length:578 Species:Rattus norvegicus


Alignment Length:516 Identity:107/516 - (20%)
Similarity:180/516 - (34%) Gaps:146/516 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IPIPDLAFTEMEAYAEDIVVDMEGGSPAKPLNPKKQRLNSATTTTINRSRGGGAAQSRLRRSAA- 204
            ||...|.:|...|||                             |..|.|......::.||.|: 
  Rat    79 IPQNRLRYTPHPAYA-----------------------------TFCRPRENWWQYTQGRRYAST 114

  Fly   205 -----IVPPR------------SIPESCASSSNSNSSSSSNSNSSSSSA---TGSSASTGNPSPC 249
                 :.||:            .:||  ....|.:|....:||...::|   ...||:|...:..
  Rat   115 PQKFYLTPPQVNSILKANEYSFKVPE--FDGKNVSSILGFDSNQLPANAPIEDRRSAATCLQTRG 177

  Fly   250 SSLGVNMRVTGQCCQGGRKYMEDQFSVAYQESPITHE--LEY--------AFFGIYDGHGGPEAA 304
            ..|||.....|..|.   :.:.::.......|.:.||  ||.        |...|...|..|. .
  Rat   178 MLLGVFDGHAGCACS---QAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPN-D 238

  Fly   305 LFAKEHLMLEIVKQKQFWSD---------QDEDVLRAIREGY--IATHFAMWREQEKWPRTANGH 358
            .|:||...|.....:.:|.:         .|.||..|:...:  :....:: ..|...|.:...:
  Rat   239 YFSKEASKLYFNSLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISL-EAQVGDPNSFLNY 302

  Fly   359 L----STAGTTATVAFMRREKIYIGHVGDSGIVLGYQNKGERNWRARPLTTDHKPESLAEKTRIQ 419
            |    :.:|.||.||.:....:::.:.|||..:||.|.: :.:|.|..|:.||..::..|..|::
  Rat   303 LVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEE-DGSWSAVTLSNDHNAQNERELERLK 366

  Fly   420 RSGGNVAIKSGVPRVVWNRPRDPMHRGPIRRRTLVDEIPFLAVARSLGDL---WSY--------- 472
            ........||.|.                :.|.|...:||    |:.||:   ||.         
  Rat   367 LEHPKNEAKSVVK----------------QDRLLGLLMPF----RAFGDVKFKWSIDLQKRVIES 411

  Fly   473 ------NSRFKEFV---------VSPDPDVKVVKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRK 522
                  ::.:.:|:         ::.:|:|...::.|.. :.|:..|||||..:..|:.|     
  Rat   412 GPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQD-KFLVLATDGLWETMHRQDVV----- 470

  Fly   523 EHLIGEILNEQDVMNP-----SKALVDQ--ALKTWAAKKMRA--DNTSVVTVILTPAARNN 574
             .::||.|.......|     .|..:.|  .|.|....||.:  ::.:..|.::..|..||
  Rat   471 -RIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNN 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 76/371 (20%)
Pdp1XP_006237970.1 PP2Cc 149..565 CDD:238083 88/415 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.