DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2C1 and ppm1db

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001007341.1 Gene:ppm1db / 492468 ZFINID:ZDB-GENE-041114-27 Length:534 Species:Danio rerio


Alignment Length:544 Identity:187/544 - (34%)
Similarity:263/544 - (48%) Gaps:139/544 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 VNMRVTGQCCQGGRKYMEDQFSVAYQESPITHELE------------------------------ 288
            :::||:....|||||||||...|..:..|...||:                              
Zfish     7 LSLRVSVFSEQGGRKYMEDLTEVIVELEPTEDELQAAGHADPKPDQEPVSDSEPPDCSNNPLPVL 71

  Fly   289 ------------------------------YAFFGIYDGHGGPEAALFAKEHLMLEIVKQKQFWS 323
                                          .|||.::|||||.|||:||::||...:.||:.|||
Zfish    72 IAWRNPLSTEEADGTDEPGTQPAAADSRRSVAFFAVFDGHGGREAAMFARDHLWDFLKKQRGFWS 136

  Fly   324 DQDEDVLRAIREGYIATHFAMWREQEKWPRTANGHLSTAGTTATVAFMRREKIYIGHVGDSGIVL 388
            .....|..|||:|:||.|.|||::..:||:|..|..||:||||:|..:|.:.:::.|||||.:||
Zfish   137 KDYRKVCSAIRKGFIACHHAMWKKLPEWPKTLTGLPSTSGTTASVVVIRGDHMFVAHVGDSSVVL 201

  Fly   389 GY-QNKGERNWRARPLTTDHKPESLAEKTRIQRSGGNVAIKSGVPRVVWNRPRDPMHRGPIRRRT 452
            |. ::..::..:|..:|.|||||...||.||:..||:|..||||.||||.||| ..|.||:||.|
Zfish   202 GVREDPSDKVIKAVEVTQDHKPELPKEKQRIEGLGGSVVKKSGVNRVVWKRPR-LSHNGPVRRST 265

  Fly   453 LVDEIPFLAVARSLGDLWSYNSRFKEFVVSPDPDVKVVKINPSTFRCLIFGTDGLWNVVTAQEAV 517
            .:|:||||||||:|||||||:....||||||:||..||.::|...|.:|.|:.||||:|..||||
Zfish   266 PIDQIPFLAVARALGDLWSYDFYSGEFVVSPEPDTSVVTLDPRRHRYIIVGSGGLWNMVPPQEAV 330

  Fly   518 DSVRKEHLIGEILNEQDV----MNPSKALVDQALKTWAAKKMRADNTSVVTVIL----------- 567
             :|.:.|       ::.|    |:.::.|...||..|..:.:|||||||:.:.|           
Zfish   331 -TVCQSH-------DEAVAPFGMSVARRLGCHALMRWRQRMLRADNTSVIVIALPEPGKPHLPMH 387

  Fly   568 --------------TPA--ARNNSPTTPTRSPS----------AMARDNDLE-VELLLEED-DEE 604
                          .||  :|:|:|...|..|.          |:.|.|.|. |.|..|.. :|.
Zfish   388 RDEVILSLAEGPHCDPATGSRSNTPLIKTPDPDLSSASSESLPALERRNGLSGVSLCAEAPLEEN 452

  Fly   605 LPTLDVENNYPDFLI--EEHEYVLDQPYSA-LAK--RHSP--PEAFRNFDYFDVDEDELDEDEET 662
            ||.:::.:. .|..:  ...:...|.|.|: :||  |.||  |.:.|               :.|
Zfish   453 LPYIELADK-TDLTVCPSGGKRTPDTPLSSPVAKRPRRSPLAPSSSR---------------KRT 501

  Fly   663 VEED---EEEEEEEEETKSVGILQ 683
            .:..   ....:.::.|.||.|||
Zfish   502 TDRSLPRRNTTKSQKRTPSVSILQ 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 151/375 (40%)
ppm1dbNP_001007341.1 PP2Cc 101..376 CDD:238083 136/283 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594618
Domainoid 1 1.000 271 1.000 Domainoid score I1775
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006472
OrthoInspector 1 1.000 - - otm24391
orthoMCL 1 0.900 - - OOG6_106734
Panther 1 1.100 - - LDO PTHR47992
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4721
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.700

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