DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2C1 and Nil

DIOPT Version :10

Sequence 1:NP_525074.2 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster


Alignment Length:427 Identity:107/427 - (25%)
Similarity:176/427 - (41%) Gaps:106/427 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 GVNMRVTGQCCQGGRKYMEDQFSVAYQ-ESPITHELEYAFFGIYDGHGGPEAALFAKEHLMLEIV 316
            |..:|......||.|..|||..|.|.: :.|..   .:::|.::|||.|.:.:|...||||..|:
  Fly    23 GNGLRYCVSSMQGWRLEMEDSHSAACRLKDPFA---TWSYFAVFDGHAGSQISLHCAEHLMSTIL 84

  Fly   317 KQKQFWSDQDEDVLRAIREGYIATHFAM---WREQEKWPRTANGHLSTAGTTATVAFMRREKIYI 378
            :.:.|...:.|   ..||||::.....|   :.:|:            .|:||...|:..:|||:
  Fly    85 ESESFSKHKYE---AGIREGFLQLDEDMRKLYHDQQ------------GGSTAICVFVSPDKIYL 134

  Fly   379 GHVGDSGIVLGYQNKGERNWRARPLTTDHKPESLAEKTRIQRSGGNVAIK--SGVPRVVWNRPRD 441
            .:.|||..|:      .||..|...|.||||.|..|:.|||.:||:|.||  :|.          
  Fly   135 VNCGDSRAVI------SRNGAAVISTIDHKPFSPKEQERIQNAGGSVMIKRINGT---------- 183

  Fly   442 PMHRGPIRRRTLVDEIPFLAVARSLGDLWSYNSRFK---EFVVSPDPDVKVVKINPSTF-RCLIF 502
                              |||:|:.||....|...|   :.:|||:||  ::..|.|.. ..::.
  Fly   184 ------------------LAVSRAFGDYDFKNDGSKSPVDQMVSPEPD--IIVCNRSEHDEFIVV 228

  Fly   503 GTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVMNPSKALVDQALKTWAAKKMRADNTSVVTVIL 567
            ..||:|:|:|:.|..:.:|...|:...|         ..:|:..|.....|..| ||.:::.::|
  Fly   229 ACDGIWDVMTSSEVCEFIRSRLLVTYDL---------PMIVNSVLDICLHKGSR-DNMTLLLLLL 283

  Fly   568 TPAARNNSPTTPTRSPSAMARDNDLE-------VELLLEEDDEELPTL---------DVENNYPD 616
                    |..|.....|:..:..|:       .|::.:.:..:..||         ::.|..|.
  Fly   284 --------PGAPKVDMDAVKAERSLDQTIVQITKEVIEKHEIHDFETLIRLMKRMAINIPNLPPG 340

  Fly   617 FLIEEHEYVLDQPYSALAKRHS--PPEAFRNFDYFDV 651
            ..:....|:::|.:      |.  |......:|||.:
  Fly   341 GGLYAKYYIIEQAF------HEKFPDTPAEIYDYFSM 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_525074.2 PP2Cc 256..567 CDD:238083 89/320 (28%)
NilNP_651472.2 PP2Cc 27..277 CDD:238083 89/313 (28%)
PP2C_C 284..355 CDD:429684 11/76 (14%)

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