DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2C1 and ppm-1.D

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_497539.3 Gene:ppm-1.D / 190269 WormBaseID:WBGene00021856 Length:766 Species:Caenorhabditis elegans


Alignment Length:664 Identity:209/664 - (31%)
Similarity:319/664 - (48%) Gaps:133/664 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 GVNMRVTGQCCQGGRKYMEDQFSVAYQESPITHELEYAFFGIYDGHGGPEAALFAKEHLMLEIVK 317
            |.|||:|....||||:||||: .|.:.|......|::.|.|::|||||..|:.:.:.||::.|.|
 Worm    16 GENMRITVAASQGGRRYMEDR-CVIHTERINNGLLDWTFVGVFDGHGGEHASEYVRRHLLMNITK 79

  Fly   318 QKQFWSDQDEDVLRAIREGYIATHFAMWREQEKWPRTANGHLSTAGTTATVAFMRREKIYIGHVG 382
            .::|.|:.|||:|.|||:|::.||..|....::||.||:|:.||||||.:..|:|..|:|.||||
 Worm    80 NQKFESNSDEDILEAIRQGFLMTHEQMRHVYDEWPYTASGYPSTAGTTVSCVFIRNGKLYTGHVG 144

  Fly   383 DSGIVLGYQNKGERNWRARPLTTDHKPESLAEKTRIQRSGGNVAIKSGVPRVVWNRPR------- 440
            ||.|.||....||.:  :|||||||||||:.|:.||.::||..|:||||.||||.||:       
 Worm   145 DSAIFLGTVENGELH--SRPLTTDHKPESVHEQLRIAKAGGETAVKSGVTRVVWKRPQKMSQFMM 207

  Fly   441 -------DPMHRGPIRRRTLVDEIPFLAVARSLGDLWSYNSRFKEFVVSPDPDVKVVKINPSTFR 498
                   ...|:.|    .:::.||||:||||||||||||.:...|:|||:||:.|.::..:.| 
 Worm   208 MTSNSNEQKHHQNP----QIMENIPFLSVARSLGDLWSYNEKTNMFIVSPEPDLGVHRLTGNDF- 267

  Fly   499 CLIFGTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVMNPSKALVDQALKTWAAKKMRADNTSVV 563
            ||:..:||:.||:|..:|:..|.||..:.|| :|:...|.|:.::..||:.|  :.:||||.::.
 Worm   268 CLVLASDGMTNVMTGDQAISIVFKEEEMVEI-HEEINRNHSRCVLRSALQKW--RSLRADNVTIA 329

  Fly   564 TVI--LTPAARN------------NSPTTPTRSPSAMARDNDLEVELLLEEDDEELPTL-----D 609
            |||  :.|....            |:....|..|.||.:.:..|..||   ..:..|.:     |
 Worm   330 TVIFDIEPIKYTDAEMLMKVGKYVNASQVLTDRPDAMLKVSKNENILL---STQRTPIIYNGSKD 391

  Fly   610 VE-----------NNYPDFLIEEHEYVLDQ-----PYSALAKRHSPPEAFRNFDYFDVDEDELDE 658
            |.           ..:.|.|:||...::.:     ..:|:|....||...|..|....||:.:..
 Worm   392 VNFCRVTYKGPGFRTHEDELLEERRNLMSKFGGVDGGAAIAIAGGPPVDARRGDTTGKDENNVKY 456

  Fly   659 DEETVEED------EEEEEEEEETKSVGILQQS-----LFNPRKTWRKSTINNSWSGVTEPEPEP 712
            |....|:|      .|||..:|...|:.::|:|     :.:|.:               .|.|..
 Worm   457 DVNGEEDDIINDITTEEEASQEIDLSLRLVQRSTAVTIIESPNR---------------PPRPHA 506

  Fly   713 DPEPDRIDVLTLDMYSHTSIDKGTNYGGSIAQSSIDPAETAENRELSELEQHLES--SYSFAESY 775
             |.|..||...::..:..::|:.:..|..|..|...|......|..:|..:.|.:  ..:..||.
 Worm   507 -PRPVFIDDSIIEEENDGNLDEKSLIGVQITPSRTSPGHCTVRRVKAEAVRKLRTPKMSTMDESS 570

  Fly   776 NS-----------------------------------------LLNEQEEQEARSRSAAAAAAAA 799
            :|                                         ||..:..:..|.:::.|:|||.
 Worm   571 SSSTPPDRRITRSASKGLKTPPTPEPPRGIIGVNPNLTADAVLLLTPRRRRSTRIQNSCASAAAP 635

  Fly   800 EAAAVEAQQTTAHS 813
            .||::..::.|..|
 Worm   636 GAASLSTEKLTQSS 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 144/326 (44%)
ppm-1.DNP_497539.3 PP2Cc 19..333 CDD:238083 143/324 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166214
Domainoid 1 1.000 247 1.000 Domainoid score I1193
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3901
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006472
OrthoInspector 1 1.000 - - oto18614
orthoMCL 1 0.900 - - OOG6_106734
Panther 1 1.100 - - LDO PTHR47992
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4185
SonicParanoid 1 1.000 - - X4721
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.680

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