DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp2C1 and ppm1d

DIOPT Version :9

Sequence 1:NP_001284867.1 Gene:Pp2C1 / 31404 FlyBaseID:FBgn0022768 Length:1427 Species:Drosophila melanogaster
Sequence 2:XP_002933883.2 Gene:ppm1d / 100489786 XenbaseID:XB-GENE-1011380 Length:551 Species:Xenopus tropicalis


Alignment Length:532 Identity:189/532 - (35%)
Similarity:262/532 - (49%) Gaps:97/532 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 MRVTGQCCQGGRKYMEDQFSVAYQ------ESPITHELE-----------------------YAF 291
            :||:....|||||||||...:..:      :.|.:.|.|                       .||
 Frog     7 LRVSFSSDQGGRKYMEDVTQILVEPEPGEDDQPWSEEEEGAGTPGRNCRRERSSSPTGGRQTVAF 71

  Fly   292 FGIYDGHGGPEAALFAKEHLMLEIVKQKQFWSDQDEDVLRAIREGYIATHFAMWREQEKWPRTAN 356
            |.:||||||.|||.||::||...|.|||.|.|...|:|..|||:|::|.|.|||::..:||:|..
 Frog    72 FAVYDGHGGREAAHFARDHLWGYITKQKGFMSRDPEEVCAAIRKGFVACHHAMWKKLPEWPKTMT 136

  Fly   357 GHLSTAGTTATVAFMRREKIYIGHVGDSGIVLGYQNKGERNWRARPLTTDHKPESLAEKTRIQRS 421
            |..||:||||:|..:|..|:|:.||||||:|.|.||....:.:|..:|.|||||...|:.||:..
 Frog   137 GLPSTSGTTASVVIIRGNKMYVAHVGDSGVVFGLQNGSRDSLKAVEVTQDHKPELPRERERIEGL 201

  Fly   422 GGNVAIKSGVPRVVWNRPRDPMHRGPIRRRTLVDEIPFLAVARSLGDLWSYNSRFKEFVVSPDPD 486
            ||:|..||||.||||.||| ..|.||:||.|:.|:||||||||:|||||||:....||||||:||
 Frog   202 GGSVINKSGVNRVVWKRPR-LTHNGPVRRSTVFDQIPFLAVARALGDLWSYDFYSGEFVVSPEPD 265

  Fly   487 VKVVKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVMNP--------SKALV 543
            ..|..|:|...:.:|.|:|||||:|:||:|:          .:..||:..:|        :|.||
 Frog   266 TSVHTIDPQKHKFIIIGSDGLWNMVSAQDAI----------SMCQEQEKASPHGDPGQTCAKMLV 320

  Fly   544 DQALKTWAAKKMRADNTSVVTVILTPAA-------------------RNNS------PTTPTRSP 583
            .:||..|..:.:||||||.|.:.::|..                   |.||      .:||..:|
 Frog   321 SRALTQWRQRMLRADNTSAVVICISPLTEKPRSCVSEELFLNLTENPRYNSQDMCHLSSTPCSTP 385

  Fly   584 SAMARDNDLEVELLLEEDDEELPTL----DVENNYPDFLIEEHEYVLDQPYSALAKRHSP----P 640
            .....|.|...:|..   .|.||||    ...:||..:..|..:        :.|...||    .
 Frog   386 PINFLDEDPWWKLTF---SEPLPTLVRRSAFSSNYAKWSSEAGK--------SKAGNSSPTCGDA 439

  Fly   641 EAFRNFDYFDVDEDELDEDEETVEEDEEEEEEEEETKSVGILQQSLFNPR-----KTWRKSTINN 700
            |...:...|.........|.:|.:.....:..:.||:.:..|:::|....     |..:::...|
 Frog   440 EISDSICLFPGSSSTASSDGKTAKVQNSSQTRKTETERLASLKRTLEESNSGPAVKKLKRNFPRN 504

  Fly   701 SWSGVTEPEPEP 712
            |......|...|
 Frog   505 SMVQTEAPSTTP 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp2C1NP_001284867.1 PP2Cc 256..567 CDD:238083 155/347 (45%)
ppm1dXP_002933883.2 PP2Cc 8..344 CDD:238083 155/346 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 267 1.000 Domainoid score I1848
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006472
OrthoInspector 1 1.000 - - oto105594
Panther 1 1.100 - - LDO PTHR47992
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4721
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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