DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and tor3a

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001025592.2 Gene:tor3a / 594980 XenbaseID:XB-GENE-1005206 Length:389 Species:Xenopus tropicalis


Alignment Length:322 Identity:102/322 - (31%)
Similarity:154/322 - (47%) Gaps:30/322 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PLQSVDPLTIGAVGAVALGAYFKEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQHIV 85
            |..|.||:.:       |..::...|  ..|...||| |...:..|...|.|.|.|||:....|:
 Frog    88 PTGSWDPMQM-------LSDWYARVT--DHAGLLDDR-ITNNLTGLRWDLGRRLHGQHVAEGLIL 142

  Fly    86 PALKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEV 150
            ..|:..:..| :..|||.:||||..|||||..|..||:.:||...||..:..::.|..||..|.|
 Frog   143 TYLERFLQHG-EPLKPLALSFHGWTGTGKNLAARIIAENLYLDSQRSRCIRVFIPQLHFPHLSHV 206

  Fly   151 SNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNT 215
            ..|:|::.|.:|:....||:.||:|||.||:|.|:...:...:....    ...:.:||:||| :
 Frog   207 EAYKVQLENQIREVSSRCPQPLFVFDEADKIPKGLLSSIRLFLSSGK----QSQSHSIFLFLS-S 266

  Fly   216 AGSHIASHLG-SVMKNGRLREDTRLSDFEPLLRKAAYNMDGGMKKT-TMIESHVIDHFIPFLPME 278
            .||:..:.|. |....||.|::....|.|..||.|.....|.:..| .::|..:||..:||||:|
 Frog   267 MGSNAINELALSFWAAGRQRKEITADDLERPLRAAIKENQGDIPLTQQLMEEGLIDGLVPFLPLE 331

  Fly   279 KAHVIKCLEAELLRWRRDPKQAN----NQKIIEDIINSSISYDRTHSLFAISGCKTLEKKVA 336
            :|||..|        .||...|.    .:|.:|.:....:.....|.||:..|||.:.::::
 Frog   332 RAHVKLC--------ARDSFVARGLPYTEKELELVAQELLFVPEEHKLFSAQGCKLVAQRIS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 47/126 (37%)
AAA 100..224 CDD:214640 46/123 (37%)
tor3aNP_001025592.2 P-loop_NTPase 113..231 CDD:304359 46/119 (39%)
AAA 162..284 CDD:214640 44/126 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7799
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47572
Panther 1 1.100 - - O PTHR10760
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X455
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.110

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