DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and tor1

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001186944.1 Gene:tor1 / 565062 ZFINID:ZDB-GENE-080917-50 Length:336 Species:Danio rerio


Alignment Length:319 Identity:103/319 - (32%)
Similarity:180/319 - (56%) Gaps:14/319 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SVDPLTIG-AVGAVA-----LGAYFKEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQ 82
            :::|::.. |||..|     |..|  ::.:..|.|||....|......|:..|:..|.|||:..|
Zfish    21 AIEPISTSIAVGMAAALTGFLAGY--QNMFYYFNECCRPEWISYNKTGLKYDLDTKLYGQHVAGQ 83

  Fly    83 HIVPALKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKE 147
            .|:.|:...: :..|.:||||:|.||..|||||||::.:|:.:|:||..|::|..:...|.||.|
Zfish    84 VILKAVTGFM-NNKKPKKPLVLSLHGWTGTGKNFVSQLLAENIYVKGMESSFVHLFTATAHFPHE 147

  Fly   148 SEVSNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFL 212
            ..:..|:.::.:.:|..:..||||:|||||:|||..|:.|.:...:|:...::|....:||||||
Zfish   148 IHIDTYKTQLQDWIRGNVSICPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFL 212

  Fly   213 SNTAGSHIASHLGSVMKNGRLREDTRLSDFEPLLRKAAY-NMDGGMKKTTMIESHVIDHFIPFLP 276
            ||..|.:|........|:|:.||:.:|...|..|..:.: |.:.|...|::|:.:::|.|:||||
Zfish   213 SNAGGENIVQVALDFWKDGKEREEIQLKHLETALSLSVFNNKNSGFWHTSLIDKNLVDFFVPFLP 277

  Fly   277 MEKAHVIKCLEAELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKKV 335
            :|..|:|:|..||::.....|    :::::|.:.:....:.:...:|::.|||.:..::
Zfish   278 LEYKHIIQCGLAEMIAKGHSP----DKEVVEKMAHDLNYFPKEERVFSMQGCKVIPSRL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 46/126 (37%)
AAA 100..224 CDD:214640 52/123 (42%)
tor1NP_001186944.1 P-loop_NTPase 50..175 CDD:304359 46/125 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580531
Domainoid 1 1.000 105 1.000 Domainoid score I6569
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 189 1.000 Inparanoid score I3879
OMA 1 1.010 - - QHG49139
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm24793
orthoMCL 1 0.900 - - OOG6_104781
Panther 1 1.100 - - LDO PTHR10760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3548
SonicParanoid 1 1.000 - - X455
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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