DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and Tor2a

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001007745.2 Gene:Tor2a / 362112 RGDID:1359111 Length:321 Species:Rattus norvegicus


Alignment Length:312 Identity:93/312 - (29%)
Similarity:162/312 - (51%) Gaps:16/312 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LTIGAVGAVALGAYFKEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVR---QHIVPALK 89
            |.:....|.|....|...:...|.||....::|.    ||..|.|.|.||...:   ..::..| 
  Rat    18 LVLALAAAAAWDVSFLRCSLGSFCECDFWPDLPG----LECDLARHLAGQPFGQGPGGEVIEGL- 77

  Fly    90 AHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYR 154
               .:|...::.||:|.||..||||::|:..:|..::..|.||.:|..:.....||..|....|:
  Rat    78 ---CTGPSPQQALVLSLHGWTGTGKSYVSSLLAQYLFRGGLRSPHVHHFSPIIHFPHPSHTEQYK 139

  Fly   155 VKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSH 219
            .::.:.|:..|.:|.||||:|||:||:|.|:.:.|...:..:..|.||:..||||||:|||.|..
  Rat   140 NELKSWVQGNLTACGRSLFLFDEMDKLPPGLMEVLKPFLGPSWVVYGTNYRKAIFIFISNTGGEQ 204

  Fly   220 IASHLGSVMKNGRLREDTRLSDFEPLLRKAAY-NMDGGMKKTTMIESHVIDHFIPFLPMEKAHVI 283
            |........::.|.||:..|.:.||.:.:|.. |...|..::.::|..::|..:||||:::.||.
  Rat   205 INQVALEAWRSRRDREEISLQEVEPAVSQAVLDNPHHGFWRSGIMEEQLLDAVVPFLPLQRHHVR 269

  Fly   284 KCLEAELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKKV 335
            .|:..||.:...:|:    :::::.:::|:..:.....||:.:||||:..::
  Rat   270 HCVLNELAQLGLEPR----EEVVQAVLDSTTYFPEEEQLFSSNGCKTVASRI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 39/129 (30%)
AAA 100..224 CDD:214640 48/123 (39%)
Tor2aNP_001007745.2 AAA_22 84..175 CDD:379165 33/90 (37%)
ClpA <154..279 CDD:223616 46/124 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340718
Domainoid 1 1.000 104 1.000 Domainoid score I6544
eggNOG 1 0.900 - - E1_KOG2170
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I3672
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D488680at33208
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm44533
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X455
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.860

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