DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Torsin and Tor1b

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001034286.1 Gene:Tor1b / 311854 RGDID:1308431 Length:336 Species:Rattus norvegicus


Alignment Length:319 Identity:116/319 - (36%)
Similarity:179/319 - (56%) Gaps:20/319 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPLTIG-AVGAV-ALGAYFK-EHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPA 87
            :|:::| |:||| ||..|.. ...||||.|||.:.. |.....|:..||..|.|||:..:.|:.|
  Rat    26 EPVSVGIAIGAVSALTGYLSYSDFYCRFTECCHEER-PLNTSALKLDLEEKLFGQHLATEVILKA 89

  Fly    88 LKAHIASGNKS-RKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVS 151
            |...  ..||: :|||.:|.||..|||||||::.:|:.:|.||.:||:|..::....||.|.::.
  Rat    90 LTGF--RNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENLYPKGLKSNFVHLFVSTLHFPHEQKIK 152

  Fly   152 NYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTA 216
            .|:.::...:|..:.:|..|:|||||:||:..|:.|.:...:||...|||....|||||||||..
  Rat   153 LYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQVDGISYRKAIFIFLSNAG 217

  Fly   217 GSHIASHLGSVMKNGRLREDTRLSDFEPLLRKAAY-NMDGGMKKTTMIESHVIDHFIPFLPMEKA 280
            |..|........:.||.||:.:|.|.||:|....: |...|:..:.:|:.::||:||||||:|..
  Rat   218 GDLITKTTLDFWRAGRKREEIQLKDLEPVLSVGVFNNKHSGLWHSGLIDKNLIDYFIPFLPLEYK 282

  Fly   281 HVIKCLEAELLRWRRDPKQANNQKIIEDIINSSIS----YDRTHSLFAISGCKTLEKKV 335
            ||..|:.||:        :|....:.|||:.|...    :.:...:::..||||::.::
  Rat   283 HVKMCVRAEM--------RARGAAVDEDIVTSVADEMTFFPKDEKIYSDKGCKTVQSRL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 47/127 (37%)
AAA 100..224 CDD:214640 52/123 (42%)
Tor1bNP_001034286.1 ClpA <60..292 CDD:223616 90/234 (38%)
Torsin 62..176 CDD:399367 41/115 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340719
Domainoid 1 1.000 104 1.000 Domainoid score I6544
eggNOG 1 0.900 - - E1_KOG2170
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I3672
OMA 1 1.010 - - QHG49139
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm44533
orthoMCL 1 0.900 - - OOG6_104781
Panther 1 1.100 - - O PTHR10760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X455
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

Return to query results.
Submit another query.