DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and Tor1a

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_659133.1 Gene:Tor1a / 30931 MGIID:1353568 Length:333 Species:Mus musculus


Alignment Length:331 Identity:113/331 - (34%)
Similarity:187/331 - (56%) Gaps:18/331 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSVLVILPLPLQSVDPLTIGAVGAVALGAYFK-EHTYCRFAECCDDRNIPARIDELERSLERTLI 75
            |::|::.|..:::|:|:::....|..|..|.. ...||.|||||......:| :.|::.|:..|.
Mouse     8 LALLLLAPCVVRAVEPISLSLALAGVLTTYISYPRLYCLFAECCGQMRSLSR-EALQKDLDNKLF 71

  Fly    76 GQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLG 140
            |||:.::.|:.|:...: |..|.:|||.:|.||..||||||.::.||:.:|..|..|:||..::.
Mouse    72 GQHLAKKVILNAVSGFL-SNPKPKKPLTLSLHGWTGTGKNFASKIIAENIYEGGLNSDYVHLFVA 135

  Fly   141 QADFPKESEVSNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNT 205
            ...||..|.::.|:.::...:|..:.:|.||:|||||:|||.:|:.|.:...:||...||.....
Mouse   136 TLHFPHASNITQYKDQLQMWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDVVDEVSYQ 200

  Fly   206 KAIFIFLSNTAGSHIASHLGSVMKNGRLREDTRLSDFEPLLRKAAY-NMDGGMKKTTMIESHVID 269
            |||||||||.....|........|:|:.||:.:|.|.||.|..:.: |.:.|...:::|:.::||
Mouse   201 KAIFIFLSNAGAERITDVALDFWKSGKQREEIKLRDMEPALAVSVFNNKNSGFWHSSLIDRNLID 265

  Fly   270 HFIPFLPMEKAHVIKCLEAELLRWRRDPKQANNQKIIEDIINSSISYDRT-----HSLFAISGCK 329
            :|:||||:|..|:..|:..|:        |:...::.|||| |.::.:.|     ..:|:..|||
Mouse   266 YFVPFLPLEYKHLKMCIRVEM--------QSRGYEVDEDII-SKVAEEMTFFPKEEKVFSDKGCK 321

  Fly   330 TLEKKV 335
            |:..|:
Mouse   322 TVFTKL 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 45/126 (36%)
AAA 100..224 CDD:214640 51/123 (41%)
Tor1aNP_659133.1 Torsin 45..170 CDD:148114 45/126 (36%)
Interaction with SNAPIN. /evidence=ECO:0000250 92..252 62/159 (39%)
Interaction with KLC1. /evidence=ECO:0000250 252..333 26/85 (31%)
Interaction with SYNE3. /evidence=ECO:0000250 313..333 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836993
Domainoid 1 1.000 102 1.000 Domainoid score I6803
eggNOG 1 0.900 - - E1_KOG2170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37263
Inparanoid 1 1.050 204 1.000 Inparanoid score I3732
Isobase 1 0.950 - 0 Normalized mean entropy S4332
OMA 1 1.010 - - QHG49139
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm42470
orthoMCL 1 0.900 - - OOG6_104781
Panther 1 1.100 - - LDO PTHR10760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3548
SonicParanoid 1 1.000 - - X455
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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