DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and Tor3a

DIOPT Version :10

Sequence 1:NP_572178.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001009683.1 Gene:Tor3a / 304884 RGDID:1310101 Length:395 Species:Rattus norvegicus


Alignment Length:327 Identity:97/327 - (29%)
Similarity:157/327 - (48%) Gaps:27/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LPL---QSVDPLTIGAVGAVALGAYFKEHTYCRFAECCDDRN--IPARIDELERSLERTLIGQHI 79
            |||   :|:|.||               ..:|||.:||...|  |......||..|...|.|||:
  Rat    88 LPLWGRRSLDMLT---------------SWFCRFQDCCSAGNCRISNNFTGLESDLRVRLHGQHL 137

  Fly    80 VRQHIVPALKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADF 144
            ..:.::.|:|.::...... |.|.:||||..||||||||..:.|.:|..|.||:.|..::....|
  Rat   138 ASKLVLEAVKGYLEMPQVG-KALALSFHGWSGTGKNFVARMLVDNLYRDGMRSDCVKMFISTFHF 201

  Fly   145 PKESEVSNYRVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVD-YNAFVDGTDNTKAI 208
            |....|..|:..:...:::|.|.|.:|.|:|||.:|:..|:.:.|...:: .:....|.:..:||
  Rat   202 PHPKYVDLYKEDLQRQMQETQRRCQQSTFVFDEAEKLHPGLLELLEPYLEPRSPETHGAELPRAI 266

  Fly   209 FIFLSNTAGSHIASHLGSVMKNGRLREDTRLSDFE-PLLRKAAYNMDGGMKKTTMIESHVIDHFI 272
            |:.|||..||.|...:..::|.|..||:..|...| ||..:...:.|.....:.:::.|:||.||
  Rat   267 FLLLSNLGGSVINEVVLGLLKAGWSREEITLQHLEMPLQAEIIKSADSSFGSSRLLKKHLIDLFI 331

  Fly   273 PFLPMEKAHVIKCLEAELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKKVAM 337
            ||||:|..||..|:....|    .......::.:::|............||:..|||::.:::.:
  Rat   332 PFLPLEYRHVRLCVRDAFL----GQDLPYTEEALDEIAKMMTYVPEEEQLFSSQGCKSISQRINL 392

  Fly   338 AI 339
            .:
  Rat   393 VL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_572178.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..175 CDD:476819 40/121 (33%)
Tor3aNP_001009683.1 Torsin 113..232 CDD:399367 40/119 (34%)

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