DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and Clpb

DIOPT Version :10

Sequence 1:NP_572178.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001404197.1 Gene:Clpb / 20480 MGIID:1100517 Length:707 Species:Mus musculus


Alignment Length:328 Identity:85/328 - (25%)
Similarity:130/328 - (39%) Gaps:57/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PLQSVD----PLTIGAVGAVALGAYFKEHTYC---RFAECCDDRNIPARIDELERSLERTLIGQH 78
            |||..:    ||.....|.|.......|..|.   |..|..:.|..|     ||:.|:..:|||.
Mouse   292 PLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFP-----LEQRLKEHIIGQE 351

  Fly    79 IVRQHIVPALKAHIASGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQAD 143
            .....:..|::...........|||..|.|..|.||..:|:|.|..|: |.::..::.  |..::
Mouse   352 SAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMH-KDAKKGFIR--LDMSE 413

  Fly   144 FPKESEVSNY--------RVKINNAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVD 200
            |.:..||:.:        ..:....:...|:.||.::.:||||||....|...:..|.|.....|
Mouse   414 FQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTD 478

  Fly   201 GTDNT----KAIFIFLSNTAGSHIASHLGSV------MKNGRLRE---DTRLSD----------- 241
            |...|    .||||..||.|...||.|...:      |...|:.|   |.::||           
Mouse   479 GKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQMSDKITISKNFKEN 543

  Fly   242 -FEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAELLRWRRDPKQANNQKI 305
             ..|:| ||.:..|..:.:        |:..:.|||...:.:|:.:..||..|.:..||.:|..:
Mouse   544 VIRPIL-KAHFRRDEFLGR--------INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITL 599

  Fly   306 IED 308
            :.|
Mouse   600 LWD 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_572178.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..175 CDD:476819 29/127 (23%)
ClpbNP_001404197.1 ANKYR <130..316 CDD:440430 7/23 (30%)
ANK repeat 137..164 CDD:293786
ANK repeat 166..197 CDD:293786
ANK repeat 265..290 CDD:293786
ClpA <339..655 CDD:440308 72/276 (26%)
Blue background indicates that the domain is not in the aligned region.

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